Mp7g05920
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. |
| Pfam | PF00187 | Chitin recognition protein |
| ProSiteProfiles | PS50842 | Expansin, family-45 endoglucanase-like domain profile. |
| SUPERFAMILY | SSF50685 | Barwin-like endoglucanases |
| PRINTS | PR00451 | Chitin-binding domain signature |
| Gene3D | G3DSA:2.40.40.10 | - |
| CDD | cd22269 | DPBB_EG45-like |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. |
| CDD | cd06921 | ChtBD1_GH19_hevein |
| Gene3D | G3DSA:3.30.60.10 | - |
| Pfam | PF03330 | Lytic transglycolase |
| PANTHER | PTHR47480 | EG45-LIKE DOMAIN CONTAINING PROTEIN |
| SMART | SM00270 | ChitinBD_3 |
| SMART | SM00837 | dpbb_1 |
| MapolyID | Mapoly0057s0079 | - |
| GO | GO:0008061 | chitin binding |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
M. polymorpha SSP candidate from the comparative bryophyte immune-peptide survey.
0 core 1 peripheral
Lyapina, I., et al. (2021)
· Plant Molecular Biology research sequence subject
M. polymorpha SSP candidate from the comparative bryophyte immune-peptide survey.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g05920 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g05920.1 AAGGTTCTGC CTTGACCTTT TTCATCGATG ATGACTTTTG CTGCTTCTGT AATCAGTCAG TCAGACAGTC ACCTGCTCAT CACCCTTTAA ATACATCACG AGAGCTCTGC TGGAAGTAAG CAATCGCATT CTTCACTTAG CAGAAGTCCC TCCTGGTACT CAGAAACCTT TGTAATGCAGGTAATCAGCG TTGCTCTCAA TTCTTTTGGA AACTCGATTT GATTATGTTT GTCAGCACAG TGATCGATCC CTTGAATGGA GGGAAGCATA TACATAGAAG CAGACCGAGT ATCTTCGTAT GTGCGCACAC GTGAATCCTT CTTACATAGT TACTCCTGCC TCTGCAGGGA TCAAAGATGT ATTTCAAGGT AATCCGAGTG GCAGTGATGT TACTCCTATT TTCCCACCTT AGCACAGCGG AACAATGTGG ACGACAAGCA GGAAATGCAG TGTGCCCTAG CAACCTTTGC TGCAGTGAGT ATGGCTGGTG TGGATCTACA TCAGCCTACT GTGGACTCAA CTGCCAAAGC GGACCATGTA CTGGCAGCTC ACCCAGCCCT CCTTCAGGCA CTCCTTCCAC TGGTGGCACG AAGACCGGGG AAGTTTCATA TTATACAGCT CCGTTTACTC GTAAGTACCT GCTGTTCCCC TTCCTGGGCC TTATGAGGGG ATGCAAAAGT CTGATGACAT TGTATGAATA CGGGATTGTG GTCAAAATCG AACTCCATTA AACGATCGAA CTGAAGATAT GCAATGATAT GGGTAATATG TAGATCTGTG AAATCTGTAG ATCCTGCTTA GGATAGATTA TTTGGAATTA TATTATTTAA CCAGATCGTT GCACATGTTC CACTTGGTTC ACATCGTAAT AATGCATGCA CAAATCTCAG CATCCGAGCT TGAAACCTAT TTGGTCGTTG CACGCAGCTT CCGCTTGTTT TGGATTCGAT GCGGGTCAGT TTCCCTCCAA TAATTACTTT GCTGCGGGAG GTGACGGAGC ACCCAACATC TGGAACAATG GTGCAAACTG TGGTAAGTGG TTCAAGATCC AGTGCACAGG CAATGGCTGT ACTAGCTCAG CTACCATCTC TATCAAGGTA GTGGATCGTT GCCCTAATGG ATGTGTAGGT GGGCGAGCAT TTGATCTGTC TGACACAGCG TTTAGAGCCA TAGCAAATCC AGACGCTGGA CATGTGAGTA TCAACTATTC CGGTCCATAT GATAGCGCGT AGTATCAGAA CACACAATAA TAAAGATGCG TTCCTCCTGT ATCTGAACCT CTGGATATCT TATTCAATAA GTGGACTCTA TATCGGAGAT TTTCTGTACT TCCCAAAAGA AAGCAGTACT GTTGCGACAC TTGTACTGAT GATGATTCAT CGTCGACATC GAATAAATTG TCTACCTTCT TGGGACAAAA GGTTGGTTCG AGTTCAGTTC TCTCTCCTGC AACTGATCAT CTTCGATCAA CCAGTTGTAC GGTTGAAACC AGTTTTCAGT TCACCATGAG CTGTGTTTGT GTTCACGCCC ATGAATGCTA GTGTCCCCAA ATTGATGAAA GACATGGAGG AATTATTTAC CTCTTAGAGC TC |
mRNA UTR + CDS |
| >Mp7g05920.1 AAGGTTCTGC CTTGACCTTT TTCATCGATG ATGACTTTTG CTGCTTCTGT AATCAGTCAG TCAGACAGTC ACCTGCTCAT CACCCTTTAA ATACATCACG AGAGCTCTGC TGGAAGTAAG CAATCGCATT CTTCACTTAG CAGAAGTCCC TCCTGGTACT CAGAAACCTT TGTAATGCAGGGATCAAAGA TGTATTTCAA GGTAATCCGA GTGGCAGTGA TGTTACTCCT ATTTTCCCAC CTTAGCACAG CGGAACAATG TGGACGACAA GCAGGAAATG CAGTGTGCCC TAGCAACCTT TGCTGCAGTG AGTATGGCTG GTGTGGATCT ACATCAGCCT ACTGTGGACT CAACTGCCAA AGCGGACCAT GTACTGGCAG CTCACCCAGC CCTCCTTCAG GCACTCCTTC CACTGGTGGC ACGAAGACCG GGGAAGTTTC ATATTATACA GCTCCGTTTA CTCCTTCCGC TTGTTTTGGA TTCGATGCGG GTCAGTTTCC CTCCAATAAT TACTTTGCTG CGGGAGGTGA CGGAGCACCC AACATCTGGA ACAATGGTGC AAACTGTGGT AAGTGGTTCA AGATCCAGTG CACAGGCAAT GGCTGTACTA GCTCAGCTAC CATCTCTATC AAGGTAGTGG ATCGTTGCCC TAATGGATGT GTAGGTGGGC GAGCATTTGA TCTGTCTGAC ACAGCGTTTA GAGCCATAGC AAATCCAGAC GCTGGACATG TGAGTATCAA CTATTCCGGT CCATATGATA GCGCGTAGTA TCAGAACACA CAATAATAAA GATGCGTTCC TCCTGTATCT GAACCTCTGG ATATCTTATT CAATAAGTGG ACTCTATATC GGAGATTTTC TGTACTTCCC AAAAGAAAGC AGTACTGTTG CGACACTTGT ACTGATGATG ATTCATCGTC GACATCGAAT AAATTGTCTA CCTTCTTGGG ACAAAAGGTT GGTTCGAGTT CAGTTCTCTC TCCTGCAACT GATCATCTTC GATCAACCAG TTGTACGGTT GAAACCAGTT TTCAGTTCAC CATGAGCTGT GTTTGTGTTC ACGCCCATGA ATGCTAGTGT CCCCAAATTG ATGAAAGACA TGGAGGAATT ATTTACCTCT TAGAGCTC |
CDS |
| >Mp7g05920.1 ATGCAGGGAT CAAAGATGTA TTTCAAGGTA ATCCGAGTGG CAGTGATGTT ACTCCTATTT TCCCACCTTA GCACAGCGGA ACAATGTGGA CGACAAGCAG GAAATGCAGT GTGCCCTAGC AACCTTTGCT GCAGTGAGTA TGGCTGGTGT GGATCTACAT CAGCCTACTG TGGACTCAAC TGCCAAAGCG GACCATGTAC TGGCAGCTCA CCCAGCCCTC CTTCAGGCAC TCCTTCCACT GGTGGCACGA AGACCGGGGA AGTTTCATAT TATACAGCTC CGTTTACTCC TTCCGCTTGT TTTGGATTCG ATGCGGGTCA GTTTCCCTCC AATAATTACT TTGCTGCGGG AGGTGACGGA GCACCCAACA TCTGGAACAA TGGTGCAAAC TGTGGTAAGT GGTTCAAGAT CCAGTGCACA GGCAATGGCT GTACTAGCTC AGCTACCATC TCTATCAAGG TAGTGGATCG TTGCCCTAAT GGATGTGTAG GTGGGCGAGC ATTTGATCTG TCTGACACAG CGTTTAGAGC CATAGCAAAT CCAGACGCTG GACATGTGAG TATCAACTAT TCCGGTCCAT ATGATAGCGC GTAG |
Protein |
| >Mp7g05920.1 MQGSKMYFKV IRVAVMLLLF SHLSTAEQCG RQAGNAVCPS NLCCSEYGWC GSTSAYCGLN CQSGPCTGSS PSPPSGTPST GGTKTGEVSY YTAPFTPSAC FGFDAGQFPS NNYFAAGGDG APNIWNNGAN CGKWFKIQCT GNGCTSSATI SIKVVDRCPN GCVGGRAFDL SDTAFRAIAN PDAGHVSINY SGPYDSA |