Mp7g06500



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR36022 GPI-ANCHORED ADHESIN-LIKE PROTEIN
KOG KOG3685 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
MapolyID Mapoly0057s0017 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

The single PIKMIN1 (PKN1) homolog of M. polymorpha (Mp7g06500); CRISPR mutants show PKN1 drives APC/C-CCS52A2 E3-ligase-dependent cell division, a plant-lineage-specific function.

1 core 0 peripheral

Willems, A., et al. (2023) · Plant Physiology  research experimental subject
The single PIKMIN1 (PKN1) homolog of M. polymorpha (Mp7g06500); CRISPR mutants show PKN1 drives APC/C-CCS52A2 E3-ligase-dependent cell division, a plant-lineage-specific function.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g06500.1 chr7:9116321..9120976 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g06500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g06500 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.