Mp7g06530
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 |
| Gene3D | G3DSA:3.40.640.10 | - |
| PRINTS | PR00800 | Aromatic-L-amino-acid decarboxylase signature |
| PANTHER | PTHR11999 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| CDD | cd06450 | DOPA_deC_like |
| Pfam | PF00282 | Pyridoxal-dependent decarboxylase conserved domain |
| Gene3D | G3DSA:1.20.1340.10 | - |
| FunFam | G3DSA:3.40.640.10:FF:000025 | Histidine decarboxylase |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases |
| KEGG | K01593 | aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] |
| KOG | KOG0628 | Aromatic-L-amino-acid/L-histidine decarboxylase; [E] |
| MapolyID | Mapoly0057s0014 | - |
| GO | GO:0016830 | carbon-carbon lyase activity |
| GO | GO:0016831 | carboxy-lyase activity |
| GO | GO:0019752 | carboxylic acid metabolic process |
| GO | GO:0006520 | amino acid metabolic process |
| GO | GO:0005737 | cytoplasm |
| GO | GO:0030170 | pyridoxal phosphate binding |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Aromatic L-amino acid/L-tryptophan decarboxylase gene tested by qPCR as a wound-responsive marker.
0 core 1 peripheral
Kneeshaw, S., et al. (2022)
· PNAS research experimental tool
Aromatic L-amino acid/L-tryptophan decarboxylase gene tested by qPCR as a wound-responsive marker.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g06530 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g06530.1 AGTTGTCGGA CATAGAGCAT TGAGGACTCA GTCCTCTTCC ACTCCTATTG TCTAAGCAAC TTGAAGCTTG CGAAGCTGCA CTCTTACGGC TTACTGCATT GTATCTTCGA CAAGCCCAAC TTAAGGCCCC GGAGTTGAAT AGCCCTGCAT TCTCGGCTGC TGCAGCTTTA AAATATCCCA GGCGTCACAC TCGAGCTGAT CTCGCACTGA CCAATTGCCA GGGTCTACAC AAGAAGGTTT CCGATTCAAA GGATCGTAGC TCGAGTTCAC AGTACTGAAA CTGTCGACGG AATACCTCAC ACTGCTGCCA TCAACTGGGC TAATTCACGA ACAAGTTCCA TTCACGTTTC GGTAGTGCTG CTGCAGACAC GTCAAGTTCA TCTCCATCTT CTCCGACTAT CAGATTTCCA TCCAAAATGT AAAATGCCCA CTCTGATACC CATCGCTACT AGATACGAGC TGCACAGGAA CTTTTCTGCT TTCATAAGCG TCGGGACTGC AAGATGCAGC TTTGGAAACG TCATGGTGGC CCTGTACGAG CTAGTCCTTT ATGACGGGCT AACGTGCATG AATGCAAGGT TTTGGGTTTA GCGTTTTGTG GGTCCAGCCA GTGGCGAGGG TCACCTACTA CATCTGTGGA AGTCCTCCTT TGAACGTAAT AGATGACATT GCTGGTCTGG GATACAACCA CACTTTGTGA CTGGAGAAAA TTCTTCTGCT CAAGATGTAG GTCAGCTTGA GATGTTCCCC TTGGATTTGA CGGAAAATAT CATTTTATGC ACGCAGGGAC TCAAGATCTG ATGCCATCAT CTCCGACAAC ATGGTCAACA AGGCCCCAAT GAGTCCTTTC AATGTGGAGG AGTTCAGACA ATCCGCGCAT CAAATGGTGG AATTCCTGGC CGATTATTAC CGTGACATTG AGTCGTATCC CGTGCGCAGT CAAGTGGAGG TGAGCAAAAT CCCAATCTGG AATATTCCAA GAAAAATGTT ACCGTGCACT TCGACGACCT TTGCATTTAG CAAGTGCGCT CATGTACATA GTTCCAAAAC GTTTCAAGAT GAGCAATGTG TCATGAGTTC GCGGGAATGT CTGGACCCAG AAAGCAGGAT TGTTTTTAGG AGCTCTCTTG CACTCCGCTA TGTCACACTG GCCTCGAAAA TATCTAAAAT AACAAATCTA TGATTGTTTA TTTGCAGCCT GGTTACCTAT ACAAGCAAAT TCCAGACACG GCCCCCGAGA GCCCAGAGAC ACTGGACGAA GTATTCTCAG GTCAGTGATA CACACGCTTC AACCGTTCGA GTAGTGAGTG GACAGTCTCT GCTCTATGGA CGTACTTCCA TCGGTTCAAA ACGATAGAAA TCGTATGATA AGAAATTTCT ATTCGGGCGG CTCGCTGTAG TCTGCTAGCA CTGCGGTGGA GACGATGGTG GGGCGACTGT CCTTTATAAA TGCTGGCTTC TTAATACACG AATGTAATGG CTACACCTGA AGCTAATATC TCGAACTTGT TATGGAACTT CCAGATGTCA AGTCCAAGAT TCTTCCCGGG ATCACACACT GGTTGAGCCC GCAGTTCCAC GCTTACTACC CAGCCAGTTT CAGTACTGCC GGTTATTTGG GAGAGATGCT CTGTGGTGGA CTTAATGTGA ATGGATTCAG TTGGATTGCG TCTCCAGCAG CAACCGAATT GGAAGTCATC GTCGTTGAAT GGCTCGGAAA GCTTCTGAAC CTCCCCAAGG AGTTCTTGAG CAGCGGAGGT GGTGGTGGTA TCATCGAGGG AACTGCTTGC GAGGCAGTGT TCGTGTGTAT TTTGGCTGCA AGGAAAAGAT TCGTTGATAA ATACACCGCA GAGGGTCTGT TGGAGGGAGA AGTGCACAGC AAGCTCGTTG CCTACACGTC GGATCAGACT CACTCATGCG TTGCTAAAGC CTGCAAGGTA CTTTCCAATC TGATCCTGTG AACATTTGGG CGCTATGAAA ATATTCGCGA GTGAGACTTT TCTTCCAATG TTAACATGCT GAGATATCTG ACATATACTG GCTCATTCCC ACAGATGGCT GGTGTTCAAG GTGACAACTT GCGAATCCTT CCCACTGATG CGTCTACAGA CTTCGCCCTC AGCCCAGCGG TCCTATTGCA GGCTATCGAA AATGATATAG CAGCAGGCTT CATCCCATTC TTCGTCTGTG GAACGGTATT AGCCTTGAAT ACCTTAATCT TCTAATTCTT AAAAGACAAT ATTCTTCTCT CGGCACAAAT TATTATTCTC ATATCTTTCA GAATCATTCA CCCCACAACT TGAAGTTTTA TGTTCTGCAT CGAATTTATT CTTTTCAGTA CCCCCCAGTG TATTTCTGAC ATGATCGGCA CAATGCAATG CAGGTTGGTA CTACTTCTTC ATCTGCTGTG GACCCACTAC ACGCCATCGG TGACCTCGCT AAGAGCTTCG GGATGTGGTT CCACATCGAT GCCGCCTATG CAGGAAGCGC TTGCATCTGC CCAGAATTCA GACCATTCCT TGACGGTGTC GAGAAGGCCG ACTCGTTCTG CCTGAACCCA CACAAGTGGC TTCTCATCAA CTTCGACAGC TCCTGCTTGT GGGTCAAGGA CCCCAAGGCC TTGGAGTCAG CTCTATCGAC CGACCCAGAG TACCTCAAGA ACAAGGTAAG CTCCATTGTT CACAGTTCAG GAAGTCGAGT ACAGCGCTTC TTGAGTGAGA TCACATGCAG CATTCGATTT GAGCACCATT CGAGTTACCG CATTGAGATC TAAACAAAAT GTGTATGATT TGCAGCACTC GGACGAGAAG AATGTTATCG ACTTCAGAAA CCTTCAGCTT CCTCTGTCCC GAAGATTCAG GGCCGTCAAG CTGTGGATGG TGATGAGAAT GTACGGAGCA AGCGGTCTGC GCACCCACAT CCGAAACGGT GTTCGTATGG CGAAGCACTT CGAGTCGTTG GTGAAGGCGA ACAGGCACTT CGAGATCGTG ACCCCGAGAA ATTTCGCCCT CGTCTGTTTC CGCGTTAAAC CTCAGGCCAA CGACCCCGAC AATGGAAAGA CCATCAACCA GAAGCTCATG GACACCATCA ACGCAAACGG GACCGTCTTC TTCACGCACA CAGTCATGGG CGGCGTCTAC ACTCTGAGGA TGGCCATTGG TGCGACGATG ACACAACCAA TCCACGTTAC TGACACCTGG GCTATTATCA CCACCGAGGC CAATCGCCTG CTGGGTTTGG ACTCCGAGAT GTGCTTCAAC TCCGACTCCG GGGCCGAGAT GTGCTCCTCC TCCGATAATG AAAGCGTCGA CTCCGACTGC GAGAGTACCC CAGTGCTAAA TCTTTCCGAC AGCGAGGAGC AACCGCTGGG AGCTGGAGCC CTGGCAGCCG CCATGAGGCC ACTCGTAGCT CTGAGCGCGT CCAATTCTTT CCAGGAAAGA ACGGAGTGCA TCGCCGTTGC TTGATTCTTT TGGGTTCGAT TTTACAGATT AACAGTTTGA CAGTTCATGG ACTCGCTGCA GCAGCTGGCA TGGTTTTGTA TCGAGCATGC ACAGCCACTT GGGATCAATT TTCTCGTACT CCTCCACAGC TGACGCTGGA ATCAATTGGA GCGCGGCTGG CCCACATAGG ATATACATTA GAAACGTAAA CTAGTCTATA GAATAGCACT TCTGTCACGC ACCACCATTT AGCATTCCAC CTCAAAATAA ATTTTATCGA TCCATTGGCA CGAGCAGAGT CGCTCTCTGC TCGTAGCAAA ATATCTAGAG TAGGTTGGTG TTAGAGCTTT GTAATCAGGA TATTGGATTT TTCATGGTGG CAAAGTGACG TCGAATAAAA AGCGCCGTGC TGATCAGTGC AAGCTGCGAT CAGCCCTGCT TCATCCTAGG TAGAGGTAAG CAGTAAGCGA TGCTTACACG AGAATTACTA CTGTTGAGGC TTTAAGTAGG CAATTAGGCT CAGTACTTAG ATTCTAGTCT ACCGGATGTA CTTCGGTTCG AAAAATTCTT TCATACGTAA TGTAAAACTA TATCATTCCC A |
mRNA UTR + CDS |
| >Mp7g06530.1 AGTTGTCGGA CATAGAGCAT TGAGGACTCA GTCCTCTTCC ACTCCTATTG TCTAAGCAAC TTGAAGCTTG CGAAGCTGCA CTCTTACGGC TTACTGCATT GTATCTTCGA CAAGCCCAAC TTAAGGCCCC GGAGTTGAAT AGCCCTGCAT TCTCGGCTGC TGCAGCTTTA AAATATCCCA GGCGTCACAC TCGAGCTGAT CTCGCACTGA CCAATTGCCA GGGTCTACAC AAGAAGGTTT CCGATTCAAA GGATCGTAGC TCGAGTTCAC AGTACTGAAA CTGTCGACGG AATACCTCAC ACTGCTGCCA TCAACTGGGC TAATTCACGA ACAAGTTCCA TTCACGTTTC GGTAGTGCTG CTGCAGACAC GTCAAGTTCA TCTCCATCTT CTCCGACTAT CAGATTTCCA TCCAAAATGG ACTCAAGATC TGATGCCATC ATCTCCGACA ACATGGTCAA CAAGGCCCCA ATGAGTCCTT TCAATGTGGA GGAGTTCAGA CAATCCGCGC ATCAAATGGT GGAATTCCTG GCCGATTATT ACCGTGACAT TGAGTCGTAT CCCGTGCGCA GTCAAGTGGA GCCTGGTTAC CTATACAAGC AAATTCCAGA CACGGCCCCC GAGAGCCCAG AGACACTGGA CGAAGTATTC TCAGATGTCA AGTCCAAGAT TCTTCCCGGG ATCACACACT GGTTGAGCCC GCAGTTCCAC GCTTACTACC CAGCCAGTTT CAGTACTGCC GGTTATTTGG GAGAGATGCT CTGTGGTGGA CTTAATGTGA ATGGATTCAG TTGGATTGCG TCTCCAGCAG CAACCGAATT GGAAGTCATC GTCGTTGAAT GGCTCGGAAA GCTTCTGAAC CTCCCCAAGG AGTTCTTGAG CAGCGGAGGT GGTGGTGGTA TCATCGAGGG AACTGCTTGC GAGGCAGTGT TCGTGTGTAT TTTGGCTGCA AGGAAAAGAT TCGTTGATAA ATACACCGCA GAGGGTCTGT TGGAGGGAGA AGTGCACAGC AAGCTCGTTG CCTACACGTC GGATCAGACT CACTCATGCG TTGCTAAAGC CTGCAAGATG GCTGGTGTTC AAGGTGACAA CTTGCGAATC CTTCCCACTG ATGCGTCTAC AGACTTCGCC CTCAGCCCAG CGGTCCTATT GCAGGCTATC GAAAATGATA TAGCAGCAGG CTTCATCCCA TTCTTCGTCT GTGGAACGGT TGGTACTACT TCTTCATCTG CTGTGGACCC ACTACACGCC ATCGGTGACC TCGCTAAGAG CTTCGGGATG TGGTTCCACA TCGATGCCGC CTATGCAGGA AGCGCTTGCA TCTGCCCAGA ATTCAGACCA TTCCTTGACG GTGTCGAGAA GGCCGACTCG TTCTGCCTGA ACCCACACAA GTGGCTTCTC ATCAACTTCG ACAGCTCCTG CTTGTGGGTC AAGGACCCCA AGGCCTTGGA GTCAGCTCTA TCGACCGACC CAGAGTACCT CAAGAACAAG CACTCGGACG AGAAGAATGT TATCGACTTC AGAAACCTTC AGCTTCCTCT GTCCCGAAGA TTCAGGGCCG TCAAGCTGTG GATGGTGATG AGAATGTACG GAGCAAGCGG TCTGCGCACC CACATCCGAA ACGGTGTTCG TATGGCGAAG CACTTCGAGT CGTTGGTGAA GGCGAACAGG CACTTCGAGA TCGTGACCCC GAGAAATTTC GCCCTCGTCT GTTTCCGCGT TAAACCTCAG GCCAACGACC CCGACAATGG AAAGACCATC AACCAGAAGC TCATGGACAC CATCAACGCA AACGGGACCG TCTTCTTCAC GCACACAGTC ATGGGCGGCG TCTACACTCT GAGGATGGCC ATTGGTGCGA CGATGACACA ACCAATCCAC GTTACTGACA CCTGGGCTAT TATCACCACC GAGGCCAATC GCCTGCTGGG TTTGGACTCC GAGATGTGCT TCAACTCCGA CTCCGGGGCC GAGATGTGCT CCTCCTCCGA TAATGAAAGC GTCGACTCCG ACTGCGAGAG TACCCCAGTG CTAAATCTTT CCGACAGCGA GGAGCAACCG CTGGGAGCTG GAGCCCTGGC AGCCGCCATG AGGCCACTCG TAGCTCTGAG CGCGTCCAAT TCTTTCCAGG AAAGAACGGA GTGCATCGCC GTTGCTTGAT TCTTTTGGGT TCGATTTTAC AGATTAACAG TTTGACAGTT CATGGACTCG CTGCAGCAGC TGGCATGGTT TTGTATCGAG CATGCACAGC CACTTGGGAT CAATTTTCTC GTACTCCTCC ACAGCTGACG CTGGAATCAA TTGGAGCGCG GCTGGCCCAC ATAGGATATA CATTAGAAAC GTAAACTAGT CTATAGAATA GCACTTCTGT CACGCACCAC CATTTAGCAT TCCACCTCAA AATAAATTTT ATCGATCCAT TGGCACGAGC AGAGTCGCTC TCTGCTCGTA GCAAAATATC TAGAGTAGGT TGGTGTTAGA GCTTTGTAAT CAGGATATTG GATTTTTCAT GGTGGCAAAG TGACGTCGAA TAAAAAGCGC CGTGCTGATC AGTGCAAGCT GCGATCAGCC CTGCTTCATC CTAGGTAGAG GTAAGCAGTA AGCGATGCTT ACACGAGAAT TACTACTGTT GAGGCTTTAA GTAGGCAATT AGGCTCAGTA CTTAGATTCT AGTCTACCGG ATGTACTTCG GTTCGAAAAA TTCTTTCATA CGTAATGTAA AACTATATCA TTCCCA |
CDS |
| >Mp7g06530.1 ATGGACTCAA GATCTGATGC CATCATCTCC GACAACATGG TCAACAAGGC CCCAATGAGT CCTTTCAATG TGGAGGAGTT CAGACAATCC GCGCATCAAA TGGTGGAATT CCTGGCCGAT TATTACCGTG ACATTGAGTC GTATCCCGTG CGCAGTCAAG TGGAGCCTGG TTACCTATAC AAGCAAATTC CAGACACGGC CCCCGAGAGC CCAGAGACAC TGGACGAAGT ATTCTCAGAT GTCAAGTCCA AGATTCTTCC CGGGATCACA CACTGGTTGA GCCCGCAGTT CCACGCTTAC TACCCAGCCA GTTTCAGTAC TGCCGGTTAT TTGGGAGAGA TGCTCTGTGG TGGACTTAAT GTGAATGGAT TCAGTTGGAT TGCGTCTCCA GCAGCAACCG AATTGGAAGT CATCGTCGTT GAATGGCTCG GAAAGCTTCT GAACCTCCCC AAGGAGTTCT TGAGCAGCGG AGGTGGTGGT GGTATCATCG AGGGAACTGC TTGCGAGGCA GTGTTCGTGT GTATTTTGGC TGCAAGGAAA AGATTCGTTG ATAAATACAC CGCAGAGGGT CTGTTGGAGG GAGAAGTGCA CAGCAAGCTC GTTGCCTACA CGTCGGATCA GACTCACTCA TGCGTTGCTA AAGCCTGCAA GATGGCTGGT GTTCAAGGTG ACAACTTGCG AATCCTTCCC ACTGATGCGT CTACAGACTT CGCCCTCAGC CCAGCGGTCC TATTGCAGGC TATCGAAAAT GATATAGCAG CAGGCTTCAT CCCATTCTTC GTCTGTGGAA CGGTTGGTAC TACTTCTTCA TCTGCTGTGG ACCCACTACA CGCCATCGGT GACCTCGCTA AGAGCTTCGG GATGTGGTTC CACATCGATG CCGCCTATGC AGGAAGCGCT TGCATCTGCC CAGAATTCAG ACCATTCCTT GACGGTGTCG AGAAGGCCGA CTCGTTCTGC CTGAACCCAC ACAAGTGGCT TCTCATCAAC TTCGACAGCT CCTGCTTGTG GGTCAAGGAC CCCAAGGCCT TGGAGTCAGC TCTATCGACC GACCCAGAGT ACCTCAAGAA CAAGCACTCG GACGAGAAGA ATGTTATCGA CTTCAGAAAC CTTCAGCTTC CTCTGTCCCG AAGATTCAGG GCCGTCAAGC TGTGGATGGT GATGAGAATG TACGGAGCAA GCGGTCTGCG CACCCACATC CGAAACGGTG TTCGTATGGC GAAGCACTTC GAGTCGTTGG TGAAGGCGAA CAGGCACTTC GAGATCGTGA CCCCGAGAAA TTTCGCCCTC GTCTGTTTCC GCGTTAAACC TCAGGCCAAC GACCCCGACA ATGGAAAGAC CATCAACCAG AAGCTCATGG ACACCATCAA CGCAAACGGG ACCGTCTTCT TCACGCACAC AGTCATGGGC GGCGTCTACA CTCTGAGGAT GGCCATTGGT GCGACGATGA CACAACCAAT CCACGTTACT GACACCTGGG CTATTATCAC CACCGAGGCC AATCGCCTGC TGGGTTTGGA CTCCGAGATG TGCTTCAACT CCGACTCCGG GGCCGAGATG TGCTCCTCCT CCGATAATGA AAGCGTCGAC TCCGACTGCG AGAGTACCCC AGTGCTAAAT CTTTCCGACA GCGAGGAGCA ACCGCTGGGA GCTGGAGCCC TGGCAGCCGC CATGAGGCCA CTCGTAGCTC TGAGCGCGTC CAATTCTTTC CAGGAAAGAA CGGAGTGCAT CGCCGTTGCT TGA |
Protein |
| >Mp7g06530.1 MDSRSDAIIS DNMVNKAPMS PFNVEEFRQS AHQMVEFLAD YYRDIESYPV RSQVEPGYLY KQIPDTAPES PETLDEVFSD VKSKILPGIT HWLSPQFHAY YPASFSTAGY LGEMLCGGLN VNGFSWIASP AATELEVIVV EWLGKLLNLP KEFLSSGGGG GIIEGTACEA VFVCILAARK RFVDKYTAEG LLEGEVHSKL VAYTSDQTHS CVAKACKMAG VQGDNLRILP TDASTDFALS PAVLLQAIEN DIAAGFIPFF VCGTVGTTSS SAVDPLHAIG DLAKSFGMWF HIDAAYAGSA CICPEFRPFL DGVEKADSFC LNPHKWLLIN FDSSCLWVKD PKALESALST DPEYLKNKHS DEKNVIDFRN LQLPLSRRFR AVKLWMVMRM YGASGLRTHI RNGVRMAKHF ESLVKANRHF EIVTPRNFAL VCFRVKPQAN DPDNGKTINQ KLMDTINANG TVFFTHTVMG GVYTLRMAIG ATMTQPIHVT DTWAIITTEA NRLLGLDSEM CFNSDSGAEM CSSSDNESVD SDCESTPVLN LSDSEEQPLG AGALAAAMRP LVALSASNSF QERTECIAVA |