Mp7g06790
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR21649 | CHLOROPHYLL A/B BINDING PROTEIN |
| SUPERFAMILY | SSF103511 | Chlorophyll a-b binding protein |
| Gene3D | G3DSA:1.10.3460.10 | Chlorophyll a/b binding protein domain |
| Pfam | PF00504 | Chlorophyll A-B binding protein |
| FunFam | G3DSA:1.10.3460.10:FF:000001 | Chlorophyll a-b binding protein, chloroplastic |
| KOG | KOG1240 | Protein kinase containing WD40 repeats; C-term missing; [T] |
| MapolyID | Mapoly0199s0012 | - |
| GO | GO:0009768 | photosynthesis, light harvesting in photosystem I |
| GO | GO:0009941 | chloroplast envelope |
| GO | GO:0010287 | plastoglobule |
| GO | GO:0009535 | chloroplast thylakoid membrane |
| GO | GO:0009416 | response to light stimulus |
| GO | GO:0016020 | membrane |
| GO | GO:0009765 | photosynthesis, light harvesting |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
PhANG ortholog whose transcript level was measured by qPCR under plastid stress; reduced response was not GUN1-dependent.
0 core 1 peripheral
Honkanen, S., et al. (2022)
· New Phytologist research experimental background
PhANG ortholog whose transcript level was measured by qPCR under plastid stress; reduced response was not GUN1-dependent.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g06790 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g06790.1 ATCATTTGTT CAGCATTTCT CTTCCATTTC CCAGAGCTTC TGCAAGTCGA AGCCATGGCC GCCGTCACCG CTTGCGCTTC CACCTCCCTC GCTGGACAGG CTCTCGGAGC CTCCAGCAAC GCCCTCGCCG CCAAGGTGAA CGTCGGCGAA GCCCGCGTCG TCATGCGTAA GACCGTGAAG AGCACCCCCA CCAGCATCTG GTATGTCCTC GCCCTGATTC CTGTGGTCCA TTTTTTCTGG AAAGCGTGAG GGATTGTGTC CGTCGCGCTC TAGAACTCTT GTCAGTGACA GTTTTCTCTT GTGGCTCGAG AGTTTTAAAT TTCGATTTCT GTTGATCACT GTTGAGAGGG CGAGAGAATG ATGCTGTCTC GTATTTCTAC GAGTCCCTTT CTTTCCGCTG GGAAGTATTA CTCACTGTTC GATGAAATGC AGGTACGGTG AGGACCGACC CAAGTACTTG GGCCCATTCT CCGGCGCCAC CCCAAGCTAC TTGACCGGTG AGTTCCCCGG GGACTACGGT TGGGACACTG CTGGACTCTC TGCTGACCCA GAGACCTTCG CTAAGAACCG TGAATTGGAG GTGATCCACT CCCGATGGGC TATGTTGGGA GCTTTGGGAT GCGTCTTCCC CGAGCTTTTG AGCAAGAACG GAGTCACCTT CGGAGAGGCT GTGTGGTTCA AGGCTGGATC TCAGATCTTC GCCGAGGGAG GTTTGGACTA CCTCGGCAAC TCGAGCCTCA TCCACGCTCA GAGCATTCTG GCCATCTGGG CTTGCCAGGT CGTGCTCATG GGAGCCATCG AGGGATACAG AGTGGCAGGA GGACCCTTGG GTGACGTTGT CGACCCAATC TACCCCGGAG GCTCATTCGA CCCCCTGAAC TTGGCTGAGG ACCCAGACAC CTTCGCCGAG CTGAAGGTGA AGGAGCTGAA GAACGGAAGA CTCGCCATGT TCTCCATGTT CGGATTCTTC GTCCAGGCCA TCGTTACCGG AAAGGGACCC ATCGAGAACT TGTCCGACCA CTTGGCTGAC CCCGTTGCCA ACAACGCGTG GGCTTACGCC ACCAACTTCA CCCCCGGATC ATAGACTACG ACGGGTCTTC GTGAAAGGAA TTCACGATCC CCAGTTCTGG ACATGTATAG TGGTATAGTG GTCTCGCCCC GGTACTTGTA AAGGAGTAGA CTGTAATTTT CTTAGCGTTC CACCCAATTT TGAGCTTGGG AAATGTCCTG GTGCTTGATC GGAATAAAAA CGTCATCCTT CAGGATGTTT TTCATCATTT GCAAGGTT |
mRNA UTR + CDS |
| >Mp7g06790.1 ATCATTTGTT CAGCATTTCT CTTCCATTTC CCAGAGCTTC TGCAAGTCGA AGCCATGGCC GCCGTCACCG CTTGCGCTTC CACCTCCCTC GCTGGACAGG CTCTCGGAGC CTCCAGCAAC GCCCTCGCCG CCAAGGTGAA CGTCGGCGAA GCCCGCGTCG TCATGCGTAA GACCGTGAAG AGCACCCCCA CCAGCATCTG GTACGGTGAG GACCGACCCA AGTACTTGGG CCCATTCTCC GGCGCCACCC CAAGCTACTT GACCGGTGAG TTCCCCGGGG ACTACGGTTG GGACACTGCT GGACTCTCTG CTGACCCAGA GACCTTCGCT AAGAACCGTG AATTGGAGGT GATCCACTCC CGATGGGCTA TGTTGGGAGC TTTGGGATGC GTCTTCCCCG AGCTTTTGAG CAAGAACGGA GTCACCTTCG GAGAGGCTGT GTGGTTCAAG GCTGGATCTC AGATCTTCGC CGAGGGAGGT TTGGACTACC TCGGCAACTC GAGCCTCATC CACGCTCAGA GCATTCTGGC CATCTGGGCT TGCCAGGTCG TGCTCATGGG AGCCATCGAG GGATACAGAG TGGCAGGAGG ACCCTTGGGT GACGTTGTCG ACCCAATCTA CCCCGGAGGC TCATTCGACC CCCTGAACTT GGCTGAGGAC CCAGACACCT TCGCCGAGCT GAAGGTGAAG GAGCTGAAGA ACGGAAGACT CGCCATGTTC TCCATGTTCG GATTCTTCGT CCAGGCCATC GTTACCGGAA AGGGACCCAT CGAGAACTTG TCCGACCACT TGGCTGACCC CGTTGCCAAC AACGCGTGGG CTTACGCCAC CAACTTCACC CCCGGATCAT AGACTACGAC GGGTCTTCGT GAAAGGAATT CACGATCCCC AGTTCTGGAC ATGTATAGTG GTATAGTGGT CTCGCCCCGG TACTTGTAAA GGAGTAGACT GTAATTTTCT TAGCGTTCCA CCCAATTTTG AGCTTGGGAA ATGTCCTGGT GCTTGATCGG AATAAAAACG TCATCCTTCA GGATGTTTTT CATCATTTGC AAGGTT |
CDS |
| >Mp7g06790.1 ATGGCCGCCG TCACCGCTTG CGCTTCCACC TCCCTCGCTG GACAGGCTCT CGGAGCCTCC AGCAACGCCC TCGCCGCCAA GGTGAACGTC GGCGAAGCCC GCGTCGTCAT GCGTAAGACC GTGAAGAGCA CCCCCACCAG CATCTGGTAC GGTGAGGACC GACCCAAGTA CTTGGGCCCA TTCTCCGGCG CCACCCCAAG CTACTTGACC GGTGAGTTCC CCGGGGACTA CGGTTGGGAC ACTGCTGGAC TCTCTGCTGA CCCAGAGACC TTCGCTAAGA ACCGTGAATT GGAGGTGATC CACTCCCGAT GGGCTATGTT GGGAGCTTTG GGATGCGTCT TCCCCGAGCT TTTGAGCAAG AACGGAGTCA CCTTCGGAGA GGCTGTGTGG TTCAAGGCTG GATCTCAGAT CTTCGCCGAG GGAGGTTTGG ACTACCTCGG CAACTCGAGC CTCATCCACG CTCAGAGCAT TCTGGCCATC TGGGCTTGCC AGGTCGTGCT CATGGGAGCC ATCGAGGGAT ACAGAGTGGC AGGAGGACCC TTGGGTGACG TTGTCGACCC AATCTACCCC GGAGGCTCAT TCGACCCCCT GAACTTGGCT GAGGACCCAG ACACCTTCGC CGAGCTGAAG GTGAAGGAGC TGAAGAACGG AAGACTCGCC ATGTTCTCCA TGTTCGGATT CTTCGTCCAG GCCATCGTTA CCGGAAAGGG ACCCATCGAG AACTTGTCCG ACCACTTGGC TGACCCCGTT GCCAACAACG CGTGGGCTTA CGCCACCAAC TTCACCCCCG GATCATAG |
Protein |
| >Mp7g06790.1 MAAVTACAST SLAGQALGAS SNALAAKVNV GEARVVMRKT VKSTPTSIWY GEDRPKYLGP FSGATPSYLT GEFPGDYGWD TAGLSADPET FAKNRELEVI HSRWAMLGAL GCVFPELLSK NGVTFGEAVW FKAGSQIFAE GGLDYLGNSS LIHAQSILAI WACQVVLMGA IEGYRVAGGP LGDVVDPIYP GGSFDPLNLA EDPDTFAELK VKELKNGRLA MFSMFGFFVQ AIVTGKGPIE NLSDHLADPV ANNAWAYATN FTPGS |