Mp7g08840



Description

Annotation

Database ID Description
Pfam PF00487 Fatty acid desaturase
PRINTS PR00363 Cytochrome B5 signature
ProSiteProfiles PS50255 Cytochrome b5 family, heme-binding domain profile.
PANTHER PTHR19353 FATTY ACID DESATURASE 2
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.10.120.10 -
Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain
SMART SM01117 Cyt_b5_2
SUPERFAMILY SSF55856 Cytochrome b5-like heme/steroid binding domain
CDD cd03506 Delta6-FADS-like
PIRSF PIRSF015921 FA_sphingolip_des
KOG KOG4232 Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [I]
MapolyID Mapoly0068s0037 -
GO GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO GO:0016491 oxidoreductase activity
GO GO:0016020 membrane
GO GO:0006629 lipid metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpFAD13 Secondary metabolism enzyme Provisional
MpDES fatty acid desaturase Published
This is a provisional entry. If you want to update the entry, please contact the administrator.

Associated Literature (AI-based literature mining, Beta-version)

fatty acid desaturase (from nomenclature)

0 core 1 peripheral

Kajikawa M, Yamato KT, Kohzu Y, Nojiri M, Sakuradani E, Shimizu S, Sakai Y, Fukuzawa H, Ohyama K. (2004) · Plant Mol Biol  research sequence subject
A fourth desaturase gene (GenBank AY583466), distinct from the three PUFA-pathway cDNAs, isolated by representational difference analysis; its sequence was exploited to design Delta-5-desaturase primers. Phylogenetically it groups with sphingolipid Delta-8-desaturases, suggesting a role in sphingolipid (rather than PUFA) desaturation; identified at sequence level, not functionally assayed. Confirmed from the Springer full-text PDF.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g08840.1 chr7:11753116..11755714 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.