Mp7g08840
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00487 | Fatty acid desaturase |
| PRINTS | PR00363 | Cytochrome B5 signature |
| ProSiteProfiles | PS50255 | Cytochrome b5 family, heme-binding domain profile. |
| PANTHER | PTHR19353 | FATTY ACID DESATURASE 2 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:3.10.120.10 | - |
| Pfam | PF00173 | Cytochrome b5-like Heme/Steroid binding domain |
| SMART | SM01117 | Cyt_b5_2 |
| SUPERFAMILY | SSF55856 | Cytochrome b5-like heme/steroid binding domain |
| CDD | cd03506 | Delta6-FADS-like |
| PIRSF | PIRSF015921 | FA_sphingolip_des |
| KOG | KOG4232 | Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [I] |
| MapolyID | Mapoly0068s0037 | - |
| GO | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water |
| GO | GO:0016491 | oxidoreductase activity |
| GO | GO:0016020 | membrane |
| GO | GO:0006629 | lipid metabolic process |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpFAD13 | Secondary metabolism enzyme | Provisional | |
| MpDES | fatty acid desaturase | Published |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Associated Literature (AI-based literature mining, Beta-version)
fatty acid desaturase (from nomenclature)
0 core 1 peripheral
Kajikawa M, Yamato KT, Kohzu Y, Nojiri M, Sakuradani E, Shimizu S, Sakai Y, Fukuzawa H, Ohyama K. (2004)
· Plant Mol Biol research sequence subject
A fourth desaturase gene (GenBank AY583466), distinct from the three PUFA-pathway cDNAs, isolated by representational difference analysis; its sequence was exploited to design Delta-5-desaturase primers. Phylogenetically it groups with sphingolipid Delta-8-desaturases, suggesting a role in sphingolipid (rather than PUFA) desaturation; identified at sequence level, not functionally assayed. Confirmed from the Springer full-text PDF.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g08840 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g08840.1 ATGCTGCGTC GTCCGTCGAA GATAGCGGGA ACACTGCACT CGCCGTCGAA GCTGAGGGCA GAAGCGATCG CTGGTTCTCT CTGGGGCCCG ATCCTGCTGC GTCTCTGTCG ATGCCTGCAG CAGTGGGCGG GCCGCAATCT CGAACTTTGA TGTTTCCCAC TGCAGCAGCT GTCATTTATT TCGCCACCTC GGCATGCGAC ATCACCAGCA CAGATCGAAG CTCCCGATGA TGATGATGTC TGAGAGCTGC TGATTGATAC TTATCCTCGC TTCTTCTTCG ATGGTATCAC CCTCGGAGTA AGCAATCTCT GCCTGCATTT TCCAGTTTTA TTGCAGCCAT TCCTTCCTTC TTTGCATCCG ATGCGAGCCA TCAGTGCAGT GGACTCACAA TGTGCTGACG GCTCGTCCGG CGTGTTTGGT TCCCTGTTCC CTGTTTTGTG TTCGCGTGTT CCTTGTTTCG GTTCCTATGG TCTGAGTGAT TTGTGAGTAT AGGGCCTCAC AACATTGGTG TTTCATGCAA TGTGGCCTTG TGCGCGGACG TTCTTCGAAT GTGGACACCT CTGCTTTTAG TCGCCGAGCC CAGTGTGACA AGGCTCCAGG GCTCTTTTCG AGTGCAATGA GTGAATGGGA TTCAATGGAA GCGTTCAGAT TGGTTGAGCT TTAGGCATTC TGGAACAGGG TGGTCGATCT TGTTCTTATG ATTCGAGAAT GATTGTCTGC AATTGTCGAA GATTTTTTCG AGGAATTGCA GTGATGCGAG GCAACTGGTG CGGTGGAGCA CCAATCGCAT AGTGGAGCAG TTGAAAAGCA TGAGATACAA TGCTCGATGC GATGCAGTCT ATTGTTTGTC GACTGGCTTC GAGTTGCACC AATCGAACCT CATTTGAGTT TGTCAAGAAC AGTTTGGAGC TCTGGTGAGG ATATGATTCG CGCGCAACTA TTCGGTCCAT TTGACTGACT TCGGAATTTG CAGGTTTGGA TGGGTCGAGT CCGGTGCAAC ATTGCCGAGT GAGGAGGAGT TGTTTGCCGT GGGGCCTTGA AGAAGGAGAA GTGTGGTCAG TGGGAGTGTG TGGTCCAAAC CCTCTTTAGT TTAGGAGGAG AAAACGATGG CCCCTAATGG ACAGGCAGTC AGTTACGAGG GGAATGGGGA ATCCAAAAAG CCATCTTTCA TGAGCATCAA CAGCGAGGAG CTGAGGAAAC ACGATAAAGT TGGCGATCTT TGGATCTCTA TCGAAGGAAA GGTGTATGAT GTCACCGATT GGTTGACGAA GCACCCAGGA GGTGAGAATG CTCTGAAGAG CTTAGCAGGG CAGGATGTAA CGGACGCATT TTTAGCCTTC CATCCTGGAA CTGCGTGGTC TCTTCTACCA CAGTTCCAGA TCGGGGTTTT GACAGACTAC GAGGTTTCTC CTATTCAAGC AGATTACAGA AAACTCCTGA CGGACTTGAA GAGGGCTGGT CTTTATAAGA ATCCCCTTCA CGTCTATGGC CAATATTTAG CTGTGATGAT CCCCATGTTC GTCCTCTGTG TTCTCGGCGT GGTCTACTCA CCGGGTTTTT GGATCCACAT TGGATGTGGA GTGCTCATGG GGTTTTTCTG GATACAAGCA GGTTTCATGG GCCATGATAT TGCCCATTCG GGAATGTTCA AGACAGGCAT AGACAAGTAT CTGAAGCTTT CGATAGGCTG CTTCACGGGC ATTGGTATGC AGTGGTGGAG GAACAATCAT AACGCCCACC ATTACTCCTG CAACTGTGTA GATTATGATC CAGATATCCA GTACATGCCT CTCTTCGCAA TCACGCCCAA GTTCTTCGCA TCTCTCTATT CTAACTTTTA TGAAAGGAAG ATGGATTTCG ACGCAGCAGC TCGGTTCCTC GTAAGCTACC AGCATTATAC ATTCTACATT GTCATGGCCC TTGCTCGAAT CAACTTGTAT GCACAAACGT TGATAGTGGC TTTCACCAGG AAGATGCCCT TCTCTACCCG GGCTTGGGAG CTTGGCGCCC TTGCATTTTA CTGGTCATGG TTTTCCCTGC TCCTGTCCTG TCTGCCCAAT AATTATCACA GGCTAGCGTT TGTGCTGAGC GCTTTTGCAA CAACTGGTAT TCAGCATGTG CAGTTCGTGT TGAATCATTT TTCATCCCCG GTCTACGAAG GTAGACCTGA GAGCAAGACA TGGTTTGAGT CACAGGTTAG AGGGAGTTTG AACATTTCGT CATCTCCTTG GACTGATTGG TTCCACGGAG GCCTCAATTT TCAGATTGAT CACCACGTTT TCCCTACCCT GCCACGCCAC AACCTGAGAA AAGTAGCTCC ATTTGTTAAG CCCCTTTGTG ACAAATACGA TCTGCCGTAT GAGTCTGTAA GTTGGTGGGA AGCAAACTTG AGGGTTTTAC GGACGCTGAA GGCAGCTGCC ATGGAGGCTC GAGACATATC GAAGCCGGCT CCCAGCCTTT CCAAGAGTCT CATTTGGGAG GCTGCCAATG CCAGAGGTTG ATTATCTCAC AATTGTGAGA GGGTGACATA GTCCATGTAA GTTACCGATG ACATTCGTTT TCACCACAAT CTTAAAAGTG CGAGTCTTAG CTCAACTAC |
mRNA UTR + CDS |
| >Mp7g08840.1 ATGCTGCGTC GTCCGTCGAA GATAGCGGGA ACACTGCACT CGCCGTCGAA GCTGAGGGCA GAAGCGATCG CTGGTTCTCT CTGGGGCCCG ATCCTGCTGC GTCTCTGTCG ATGCCTGCAG CAGTGGGCGG GCCGCAATCT CGAACTTTGA TGTTTCCCAC TGCAGCAGCT GTCATTTATT TCGCCACCTC GGCATGCGAC ATCACCAGCA CAGATCGAAG CTCCCGATGA TGATGATGTC TGAGAGCTGC TGATTGATAC TTATCCTCGC TTCTTCTTCG ATGGTATCAC CCTCGGAGTT TGGATGGGTC GAGTCCGGTG CAACATTGCC GAGTGAGGAG GAGTTGTTTG CCGTGGGGCC TTGAAGAAGG AGAAGTGTGG TCAGTGGGAG TGTGTGGTCC AAACCCTCTT TAGTTTAGGA GGAGAAAACG ATGGCCCCTA ATGGACAGGC AGTCAGTTAC GAGGGGAATG GGGAATCCAA AAAGCCATCT TTCATGAGCA TCAACAGCGA GGAGCTGAGG AAACACGATA AAGTTGGCGA TCTTTGGATC TCTATCGAAG GAAAGGTGTA TGATGTCACC GATTGGTTGA CGAAGCACCC AGGAGGTGAG AATGCTCTGA AGAGCTTAGC AGGGCAGGAT GTAACGGACG CATTTTTAGC CTTCCATCCT GGAACTGCGT GGTCTCTTCT ACCACAGTTC CAGATCGGGG TTTTGACAGA CTACGAGGTT TCTCCTATTC AAGCAGATTA CAGAAAACTC CTGACGGACT TGAAGAGGGC TGGTCTTTAT AAGAATCCCC TTCACGTCTA TGGCCAATAT TTAGCTGTGA TGATCCCCAT GTTCGTCCTC TGTGTTCTCG GCGTGGTCTA CTCACCGGGT TTTTGGATCC ACATTGGATG TGGAGTGCTC ATGGGGTTTT TCTGGATACA AGCAGGTTTC ATGGGCCATG ATATTGCCCA TTCGGGAATG TTCAAGACAG GCATAGACAA GTATCTGAAG CTTTCGATAG GCTGCTTCAC GGGCATTGGT ATGCAGTGGT GGAGGAACAA TCATAACGCC CACCATTACT CCTGCAACTG TGTAGATTAT GATCCAGATA TCCAGTACAT GCCTCTCTTC GCAATCACGC CCAAGTTCTT CGCATCTCTC TATTCTAACT TTTATGAAAG GAAGATGGAT TTCGACGCAG CAGCTCGGTT CCTCGTAAGC TACCAGCATT ATACATTCTA CATTGTCATG GCCCTTGCTC GAATCAACTT GTATGCACAA ACGTTGATAG TGGCTTTCAC CAGGAAGATG CCCTTCTCTA CCCGGGCTTG GGAGCTTGGC GCCCTTGCAT TTTACTGGTC ATGGTTTTCC CTGCTCCTGT CCTGTCTGCC CAATAATTAT CACAGGCTAG CGTTTGTGCT GAGCGCTTTT GCAACAACTG GTATTCAGCA TGTGCAGTTC GTGTTGAATC ATTTTTCATC CCCGGTCTAC GAAGGTAGAC CTGAGAGCAA GACATGGTTT GAGTCACAGG TTAGAGGGAG TTTGAACATT TCGTCATCTC CTTGGACTGA TTGGTTCCAC GGAGGCCTCA ATTTTCAGAT TGATCACCAC GTTTTCCCTA CCCTGCCACG CCACAACCTG AGAAAAGTAG CTCCATTTGT TAAGCCCCTT TGTGACAAAT ACGATCTGCC GTATGAGTCT GTAAGTTGGT GGGAAGCAAA CTTGAGGGTT TTACGGACGC TGAAGGCAGC TGCCATGGAG GCTCGAGACA TATCGAAGCC GGCTCCCAGC CTTTCCAAGA GTCTCATTTG GGAGGCTGCC AATGCCAGAG GTTGATTATC TCACAATTGT GAGAGGGTGA CATAGTCCAT GTAAGTTACC GATGACATTC GTTTTCACCA CAATCTTAAA AGTGCGAGTC TTAGCTCAAC TAC |
CDS |
| >Mp7g08840.1 ATGGCCCCTA ATGGACAGGC AGTCAGTTAC GAGGGGAATG GGGAATCCAA AAAGCCATCT TTCATGAGCA TCAACAGCGA GGAGCTGAGG AAACACGATA AAGTTGGCGA TCTTTGGATC TCTATCGAAG GAAAGGTGTA TGATGTCACC GATTGGTTGA CGAAGCACCC AGGAGGTGAG AATGCTCTGA AGAGCTTAGC AGGGCAGGAT GTAACGGACG CATTTTTAGC CTTCCATCCT GGAACTGCGT GGTCTCTTCT ACCACAGTTC CAGATCGGGG TTTTGACAGA CTACGAGGTT TCTCCTATTC AAGCAGATTA CAGAAAACTC CTGACGGACT TGAAGAGGGC TGGTCTTTAT AAGAATCCCC TTCACGTCTA TGGCCAATAT TTAGCTGTGA TGATCCCCAT GTTCGTCCTC TGTGTTCTCG GCGTGGTCTA CTCACCGGGT TTTTGGATCC ACATTGGATG TGGAGTGCTC ATGGGGTTTT TCTGGATACA AGCAGGTTTC ATGGGCCATG ATATTGCCCA TTCGGGAATG TTCAAGACAG GCATAGACAA GTATCTGAAG CTTTCGATAG GCTGCTTCAC GGGCATTGGT ATGCAGTGGT GGAGGAACAA TCATAACGCC CACCATTACT CCTGCAACTG TGTAGATTAT GATCCAGATA TCCAGTACAT GCCTCTCTTC GCAATCACGC CCAAGTTCTT CGCATCTCTC TATTCTAACT TTTATGAAAG GAAGATGGAT TTCGACGCAG CAGCTCGGTT CCTCGTAAGC TACCAGCATT ATACATTCTA CATTGTCATG GCCCTTGCTC GAATCAACTT GTATGCACAA ACGTTGATAG TGGCTTTCAC CAGGAAGATG CCCTTCTCTA CCCGGGCTTG GGAGCTTGGC GCCCTTGCAT TTTACTGGTC ATGGTTTTCC CTGCTCCTGT CCTGTCTGCC CAATAATTAT CACAGGCTAG CGTTTGTGCT GAGCGCTTTT GCAACAACTG GTATTCAGCA TGTGCAGTTC GTGTTGAATC ATTTTTCATC CCCGGTCTAC GAAGGTAGAC CTGAGAGCAA GACATGGTTT GAGTCACAGG TTAGAGGGAG TTTGAACATT TCGTCATCTC CTTGGACTGA TTGGTTCCAC GGAGGCCTCA ATTTTCAGAT TGATCACCAC GTTTTCCCTA CCCTGCCACG CCACAACCTG AGAAAAGTAG CTCCATTTGT TAAGCCCCTT TGTGACAAAT ACGATCTGCC GTATGAGTCT GTAAGTTGGT GGGAAGCAAA CTTGAGGGTT TTACGGACGC TGAAGGCAGC TGCCATGGAG GCTCGAGACA TATCGAAGCC GGCTCCCAGC CTTTCCAAGA GTCTCATTTG GGAGGCTGCC AATGCCAGAG GTTGA |
Protein |
| >Mp7g08840.1 MAPNGQAVSY EGNGESKKPS FMSINSEELR KHDKVGDLWI SIEGKVYDVT DWLTKHPGGE NALKSLAGQD VTDAFLAFHP GTAWSLLPQF QIGVLTDYEV SPIQADYRKL LTDLKRAGLY KNPLHVYGQY LAVMIPMFVL CVLGVVYSPG FWIHIGCGVL MGFFWIQAGF MGHDIAHSGM FKTGIDKYLK LSIGCFTGIG MQWWRNNHNA HHYSCNCVDY DPDIQYMPLF AITPKFFASL YSNFYERKMD FDAAARFLVS YQHYTFYIVM ALARINLYAQ TLIVAFTRKM PFSTRAWELG ALAFYWSWFS LLLSCLPNNY HRLAFVLSAF ATTGIQHVQF VLNHFSSPVY EGRPESKTWF ESQVRGSLNI SSSPWTDWFH GGLNFQIDHH VFPTLPRHNL RKVAPFVKPL CDKYDLPYES VSWWEANLRV LRTLKAAAME ARDISKPAPS LSKSLIWEAA NARG |