Mp7g09740



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00249 Myb-like DNA-binding domain
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS50110 Response regulatory domain profile.
Gene3D G3DSA:3.40.50.2300 -
SMART SM00448 REC_2
FunFam G3DSA:1.10.10.60:FF:000007 Two-component response regulator
PANTHER PTHR31312 TRANSCRIPTION ACTIVATOR GLK1
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
Pfam PF00072 Response regulator receiver domain
Gene3D G3DSA:1.10.10.60 -
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
SUPERFAMILY SSF52172 CheY-like
KOG KOG0307 Vesicle coat complex COPII, subunit SEC31; N-term missing; [U]
KOG KOG4677 Golgi integral membrane protein; C-term missing; [UR]
MapolyID Mapoly0156s0007 -
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0000160 phosphorelay signal transduction system
GO GO:0003677 DNA binding
GO GO:0000976 transcription cis-regulatory region binding
GO GO:0045893 positive regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpGARP8 transcription factor, GARP Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g09740.1 chr7:12794393..12799863 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g09740.2 chr7:12794393..12799863 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.