Mp7g11540



Description

Annotation

Database ID Description
SUPERFAMILY SSF53748 Phosphoglycerate kinase
PRINTS PR00477 Phosphoglycerate kinase family signature
Pfam PF00162 Phosphoglycerate kinase
Gene3D G3DSA:3.40.50.1260 -
PANTHER PTHR11406 PHOSPHOGLYCERATE KINASE
KEGG K00927 phosphoglycerate kinase [EC:2.7.2.3]
KOG KOG1367 3-phosphoglycerate kinase; [G]
MapolyID Mapoly0003s0167 -
GO GO:0006094 gluconeogenesis
GO GO:0043531 ADP binding
GO GO:0006096 glycolytic process
GO GO:0005524 ATP binding
GO GO:0004618 phosphoglycerate kinase activity
GO GO:0005829 cytosol

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

3-phosphoglycerate kinase; listed in Table 1 among MpKAN-responsive DEGs.

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
3-phosphoglycerate kinase; listed in Table 1 among MpKAN-responsive DEGs.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g11540.1 chr7:14720764..14727460 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g11540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g11540 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.