Mp7g11980



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
Pfam PF03492 SAM dependent carboxyl methyltransferase
PANTHER PTHR31009 S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
Gene3D G3DSA:1.10.1200.270 -
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
MapolyID Mapoly0003s0211 -
GO GO:0008168 methyltransferase activity
GO GO:0032259 methylation
GO GO:0008757 S-adenosylmethionine-dependent methyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpIAMT1 Auxin related protein, Hormone related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Auxin related protein, Hormone related protein (from nomenclature)

0 core 1 peripheral

Csicsely, E., et al. (2025) · The Plant Journal  research experimental background
IAA methyltransferase (Mp7g11980); DE in Mpdcl1a.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g11980.1 chr7:15253490..15257097 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g11980 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g11980 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.