Mp7g12160



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF13837 Myb/SANT-like DNA-binding domain
Gene3D G3DSA:1.10.10.60 -
KOG KOG4282 Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [K]
KOG KOG0994 Extracellular matrix glycoprotein Laminin subunit beta; N-term missing; [W]
MapolyID Mapoly0003s0229 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTrihelix39 transcription factor, Trihelix Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp7g12160.1 chr7:15395154..15397781 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g12160.2 chr7:15395154..15397781 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g12160 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g12160 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.