Mp7g13040



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.1110 SGNH hydrolase
Pfam PF00657 GDSL-like Lipase/Acylhydrolase
CDD cd01837 SGNH_plant_lipase_like
SUPERFAMILY SSF52266 SGNH hydrolase
PANTHER PTHR45642 GDSL ESTERASE/LIPASE EXL3
MapolyID Mapoly0003s0312 -
GO GO:0016788 hydrolase activity, acting on ester bonds

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

GDSL lipase/esterase; cuticle-related DEG in Mpsbg9.

0 core 1 peripheral

Xu, B., et al. (2021) · New Phytologist  research experimental background
GDSL lipase/esterase; cuticle-related DEG in Mpsbg9.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g13040.1 chr7:16312380..16317209 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g13040 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g13040 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.