Mp7g13910



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Pfam PF02386 Cation transport protein
PANTHER PTHR31064 POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED
KEGG K24976 Trk/Ktr/HKT type cation transporter
KOG KOG1341 Na+/K+ transporter; N-term missing; [P]
KOG KOG1830 Wiskott Aldrich syndrome proteins; N-term missing; C-term missing; [Z]
MapolyID Mapoly0009s0076 -
GO GO:0055085 transmembrane transport
GO GO:0006812 monoatomic cation transport
GO GO:0008324 monoatomic cation transmembrane transporter activity
GO GO:0005886 plasma membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpHKT Channels Provisional

Associated Literature (AI-based literature mining, Beta-version)

HKT-type Na+/K+ transporter (Mp7g13910); the single HKT gene in M. polymorpha. Its atypical terminal hydrophilic domain shapes transport function (oocyte electrophysiology; KO/OE lines).

1 core 0 peripheral

Imran, S., et al. (2022) · Plant & Cell Physiology  research experimental subject
HKT-type Na+/K+ transporter (Mp7g13910); the single HKT gene in M. polymorpha. Its atypical terminal hydrophilic domain shapes transport function (oocyte electrophysiology; KO/OE lines).

Transcript models

Transcript ID Location Sequences Extract region
Mp7g13910.1 chr7:17667890..17675983 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g13910 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g13910 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.