Mp7g14090
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00081 | Iron/manganese superoxide dismutases, alpha-hairpin domain |
| PANTHER | PTHR42769 | SUPEROXIDE DISMUTASE |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSitePatterns | PS00088 | Manganese and iron superoxide dismutases signature. |
| Gene3D | G3DSA:3.55.40.20 | - |
| Coils | Coil | Coil |
| PRINTS | PR01703 | Manganese superoxide dismutase signature |
| SUPERFAMILY | SSF54719 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| FunFam | G3DSA:1.10.287.990:FF:000002 | Superoxide dismutase |
| SUPERFAMILY | SSF46609 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| Gene3D | G3DSA:1.10.287.990 | Fe,Mn superoxide dismutase (SOD) domain |
| Pfam | PF02777 | Iron/manganese superoxide dismutases, C-terminal domain |
| KEGG | K04564 | superoxide dismutase, Fe-Mn family [EC:1.15.1.1] |
| KOG | KOG0876 | Manganese superoxide dismutase; [P] |
| MapolyID | Mapoly0009s0094 | - |
| GO | GO:0006801 | superoxide metabolic process |
| GO | GO:0004784 | superoxide dismutase activity |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0042644 | chloroplast nucleoid |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSOD5 | Superoxido dismutase | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g14090 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g14090.1 GATCTGATCT GCCGGGGCCT GGCCAATCTT CGACTACGGA AGCAGGCGCT GGCTGTACTT GAGGCGTGTG CATGCCTCGA GCTCACCTCA TTCCGACACC CCATCCCTTT TCCCAGAGTC GAGAATCCAT CCCGCCCTCC GCAACCGTGC TATCGAGCGA GCGAGCAGCC ATGGCAATGG CAGCAGTTAC CGGGACTCGG TGCCTTCTGC CTGTTCCTTC GCTTCGGTCG TCCAAGGCTC GACCCTCAAA TGCCACCTCT CTGGTGAGAA TTTCGTCGTC ACTTGCCTTA GTTTGTTTGT TGGGTTCGTC GATGTGTTCT TGGGTTTGGT TGGTTGTGGA CTGCGTTTGA AGCATCTTCT GGAGTGACTG CGTGTTTCTG GGGTCGTGGA TTTGATTTCG TTTTGGTCGA GGATAGTGTC TACTCGAAAG AATTCAGGGT AGTGATCCAC TTGTTCATGC GGACGAGGAA TTGGCCGGGA GCCTGTGAGC CGATGGCGAA TGCTGAACGG CGTGTAGGGT TATTGGGAAA TTAGCCAAGC GGGAGTCGTG AATGTGCCTC TGTGTCGAAT ATAGTGTTAC ACGCTGGGGT GTTAATAGTC CTCAGCTCAT TCACCACCCA CTCAATTTCT TGCCAAGTAT GCTTTTCCTG TTTTGCTCTT CATTTTCAGC TGCGTACATT CCATACAACC AAAGGTCCGC CGATGTATTC ATGCCACTCC GAGGGATGTC GGTGAAAGTC TCCGCTGCAC AAATGTGATT CAATTGTGCT TGCTTGTGTA TTGTAACCGT AATTAGTCGT GGTTACCTTG TGTATCGCAT CTCTTGATTG AATCTGTTCG AGCTGGCCCA TAGGAAAATT TCCTTATCGG GTTTATCACT TGGGACCTAT GCAATAAGCT TGGAGTTGCT CTGATTAAAC TTCTCCTGAT GGATTTGATG TGGTGTGTTC CAGAAAGTTA AGCTTCCGCT TGGTGCTCCC GTTGCCAAGT TCGACTTGGC GGACCCTCCT TACCCTCTGG TAAGCTTCTT GCATTTTTAT TTCTAATCTC CGAATGCTAG ATGGCTGAAA TGCAGTCATA GATCATCATA GATCTGAGAA TCATTTTTCA TCTCGACGTC ATATTTGTCG TAGGATTTCA ACGTATAAGA CATTTAAAAA TTGTGCAGGA TGCCTTGGAG CCACACATGA GCAAGGAGAC CCTTGAATTT CACTGGGGAA AGCACCACCG AGCTTACGTC AACAACTTGA ACGGGCAGAT CGAGAACTCT GACTTGGAGA GAAACACTCT TGAAGAGATT GTCCAGAGCT CTTACAACAA TGGCAACCCT ACCCCAGCTT TTAACAACGC CGGCCAGGTG TGTGGTCTGA ACTATGCCCA TGTCGTCGAT TGGGTCCCGT AAGTATTGAA GAAGTTGCAG TCAGTTGTGG CAATGAAATT GACTATAGCT CAATTTACCC TATGCAGATT TGGAATCACG ACTTCTTCTG GCAGTCAATG AAGCCAGGAG GTGGTGGCCC GCCCACCGGT GAGGTCGCAG AGCTCATCAA CAGAGACTTC GGAAGCTACG ACAACTTCGT GAAGGAATTC AAGGCTGGAG GAGCCACCCA ATTCGGTTCT GGATGGGCCT GGCTTGTGTG TAAGTTCCAC TCTTATTATC AGGTTCTCCC GTAGGTATCT TCTCATGAAA ATATTTTGTA GAGTTTATAG TAGATCGAAA ATGCATGGGT CCTCCGGATA TCATCTTTAT CGGCTTGTCA GTGGAAAATG ACCACAAATG CGTCAAATAT AATATGCATA TATTTCCACT ATTCTAATCT ACGGATCGTA CATAGTATAC AAAATAAGAC TCCAAATTAT TTCTAAGATG AGCTCCAGCT CATTTTATGA TGCTTGACTT CTCATTGCAG TGAAGAATGG CAAGCTCGCC ATTGAAAAGA CTCCGAATGC AGTTACCCCT ATCCTCTGGG GCAGCATTGT AAGTTTCTCT CAAGCCATTG TGGATATTTA CATGTGTTGC AGAAATGATG ACTTCTGAAA TTAGTCCTTG GCTTGTTTTT CCTCCGTGCA AGATATAGTC TCCTAACACA CTGTTATGTT TTTTGCAGCC TCTTCTTGTT GTGGACGTCT GGGAGGTAAA TATACATATG AACACCTATC TGAGGGAAGA AATCTTTTAT GCAGATTTTT CATTTTGTAA TATTTCTGCC TAGCTGTTGT CGACTGTGTT TAGCCAGACC AATATGTCGG ATCTTGAATT TCACAGACTC GTCAATCCAA GACCTCTACT TCATTTGTCT TAGATCATAA TTTTCTCAAG CTTGAAGGTG ATACACACTT TGCTCTCGTT TTCTACCATA CTAACGCCGG TGAATCTACT TTGACAACGC AGCACGCATA TTACCTCGAC TTTCAGGTAA CTGAAATTTC CTGAACGACT TACTAACAAT TGTCTTCGCT ACATTGATCT CTCAGTTTGG TCTTCTAATG TTGACATTCT TTGCTGCATG AGTACTACTA GTATACTTTT GCCACAGGTT GCAAAGTACC TTTTGATTGG GTATAACAGA TGTTTTGAGT TATTATAGAT ATAACTTCTA TGCAGATCGC TCATTTTGAT TTTGGTTAAT GCAGAACCGA AGGCCAGATT ACTTGAGCAC CTTTGTGAAC GAGCTGATCA GCTGGGACGC AGTGAACGAG CGTCTCGCCC GAGCCAAGGC TAGCGTAAAT CTCGGCACCC CTTCCATCCC TGAGCAGTAA GAAAAATCCG TACTGCGTGA GGGAGAAATT ATAGCAGCAG AGTGTCATGT ACAACCTACA AAAATACGAG TGTAAATCAA ACTTTTGAGG CTTTCTATAT GTAACGAAAT TGAGAATGCA CGTATGCAAG ATCGTATTTC GCCATGGTGT GTTTCCACCA AATCTCATGT TTTTGTGTTC AACACTCGAA ACTTGGGCAG AAAAATTGAT ATCAGTGTGA GCATGGGCAC AAGTCGATCA TATGGAGAAC TTTAAAAGTT TCAACACGTC ACAATGCGGT ACATATTC |
mRNA UTR + CDS |
| >Mp7g14090.1 GATCTGATCT GCCGGGGCCT GGCCAATCTT CGACTACGGA AGCAGGCGCT GGCTGTACTT GAGGCGTGTG CATGCCTCGA GCTCACCTCA TTCCGACACC CCATCCCTTT TCCCAGAGTC GAGAATCCAT CCCGCCCTCC GCAACCGTGC TATCGAGCGA GCGAGCAGCC ATGGCAATGG CAGCAGTTAC CGGGACTCGG TGCCTTCTGC CTGTTCCTTC GCTTCGGTCG TCCAAGGCTC GACCCTCAAA TGCCACCTCT CTGAAAGTTA AGCTTCCGCT TGGTGCTCCC GTTGCCAAGT TCGACTTGGC GGACCCTCCT TACCCTCTGG ATGCCTTGGA GCCACACATG AGCAAGGAGA CCCTTGAATT TCACTGGGGA AAGCACCACC GAGCTTACGT CAACAACTTG AACGGGCAGA TCGAGAACTC TGACTTGGAG AGAAACACTC TTGAAGAGAT TGTCCAGAGC TCTTACAACA ATGGCAACCC TACCCCAGCT TTTAACAACG CCGGCCAGAT TTGGAATCAC GACTTCTTCT GGCAGTCAAT GAAGCCAGGA GGTGGTGGCC CGCCCACCGG TGAGGTCGCA GAGCTCATCA ACAGAGACTT CGGAAGCTAC GACAACTTCG TGAAGGAATT CAAGGCTGGA GGAGCCACCC AATTCGGTTC TGGATGGGCC TGGCTTGTGT TGAAGAATGG CAAGCTCGCC ATTGAAAAGA CTCCGAATGC AGTTACCCCT ATCCTCTGGG GCAGCATTCC TCTTCTTGTT GTGGACGTCT GGGAGCACGC ATATTACCTC GACTTTCAGA ACCGAAGGCC AGATTACTTG AGCACCTTTG TGAACGAGCT GATCAGCTGG GACGCAGTGA ACGAGCGTCT CGCCCGAGCC AAGGCTAGCG TAAATCTCGG CACCCCTTCC ATCCCTGAGC AGTAAGAAAA ATCCGTACTG CGTGAGGGAG AAATTATAGC AGCAGAGTGT CATGTACAAC CTACAAAAAT ACGAGTGTAA ATCAAACTTT TGAGGCTTTC TATATGTAAC GAAATTGAGA ATGCACGTAT GCAAGATCGT ATTTCGCCAT GGTGTGTTTC CACCAAATCT CATGTTTTTG TGTTCAACAC TCGAAACTTG GGCAGAAAAA TTGATATCAG TGTGAGCATG GGCACAAGTC GATCATATGG AGAACTTTAA AAGTTTCAAC ACGTCACAAT GCGGTACATA TTC |
CDS |
| >Mp7g14090.1 ATGCCTCGAG CTCACCTCAT TCCGACACCC CATCCCTTTT CCCAGAGTCG AGAATCCATC CCGCCCTCCG CAACCGTGCT ATCGAGCGAG CGAGCAGCCA TGGCAATGGC AGCAGTTACC GGGACTCGGT GCCTTCTGCC TGTTCCTTCG CTTCGGTCGT CCAAGGCTCG ACCCTCAAAT GCCACCTCTC TGAAAGTTAA GCTTCCGCTT GGTGCTCCCG TTGCCAAGTT CGACTTGGCG GACCCTCCTT ACCCTCTGGA TGCCTTGGAG CCACACATGA GCAAGGAGAC CCTTGAATTT CACTGGGGAA AGCACCACCG AGCTTACGTC AACAACTTGA ACGGGCAGAT CGAGAACTCT GACTTGGAGA GAAACACTCT TGAAGAGATT GTCCAGAGCT CTTACAACAA TGGCAACCCT ACCCCAGCTT TTAACAACGC CGGCCAGATT TGGAATCACG ACTTCTTCTG GCAGTCAATG AAGCCAGGAG GTGGTGGCCC GCCCACCGGT GAGGTCGCAG AGCTCATCAA CAGAGACTTC GGAAGCTACG ACAACTTCGT GAAGGAATTC AAGGCTGGAG GAGCCACCCA ATTCGGTTCT GGATGGGCCT GGCTTGTGTT GAAGAATGGC AAGCTCGCCA TTGAAAAGAC TCCGAATGCA GTTACCCCTA TCCTCTGGGG CAGCATTCCT CTTCTTGTTG TGGACGTCTG GGAGCACGCA TATTACCTCG ACTTTCAGAA CCGAAGGCCA GATTACTTGA GCACCTTTGT GAACGAGCTG ATCAGCTGGG ACGCAGTGAA CGAGCGTCTC GCCCGAGCCA AGGCTAGCGT AAATCTCGGC ACCCCTTCCA TCCCTGAGCA GTAA |
Protein |
| >Mp7g14090.1 MPRAHLIPTP HPFSQSRESI PPSATVLSSE RAAMAMAAVT GTRCLLPVPS LRSSKARPSN ATSLKVKLPL GAPVAKFDLA DPPYPLDALE PHMSKETLEF HWGKHHRAYV NNLNGQIENS DLERNTLEEI VQSSYNNGNP TPAFNNAGQI WNHDFFWQSM KPGGGGPPTG EVAELINRDF GSYDNFVKEF KAGGATQFGS GWAWLVLKNG KLAIEKTPNA VTPILWGSIP LLVVDVWEHA YYLDFQNRRP DYLSTFVNEL ISWDAVNERL ARAKASVNLG TPSIPEQ |