Mp7g14210



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.510.10:FF:000016 Somatic embryogenesis receptor-like kinase 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Pfam PF00560 Leucine Rich Repeat
PANTHER PTHR47988 SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1
Pfam PF00069 Protein kinase domain
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
SMART SM00220 serkin_6
PRINTS PR00019 Leucine-rich repeat signature
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Pfam PF13855 Leucine rich repeat
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
FunFam G3DSA:3.30.200.20:FF:000015 Somatic embryogenesis receptor kinase 1
FunFam G3DSA:3.80.10.10:FF:000275 Leucine-rich repeat receptor-like protein kinase
Pfam PF08263 Leucine rich repeat N-terminal domain
ProSiteProfiles PS50011 Protein kinase domain profile.
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0009s0106 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpCIK1 LRR-RLK, peptide receptor Provisional

Associated Literature (AI-based literature mining, Beta-version)

Single CIK ortholog (Mp7g14210); CRISPR knockouts (Mpcik-ge) are insensitive to MpCLE2 peptide and phenocopy Mpclv1. Co-IP shows MpCIK weakly associates with both MpCLV1 and MpTDR, acting as a coreceptor for CLE perception. Partly involved in MpCLE1/TDIF signaling.

1 core 1 peripheral

Takahashi, G., et al. (2021) · Frontiers in Plant Science  research experimental subject
Single CIK ortholog (Mp7g14210); CRISPR knockouts (Mpcik-ge) are insensitive to MpCLE2 peptide and phenocopy Mpclv1. Co-IP shows MpCIK weakly associates with both MpCLV1 and MpTDR, acting as a coreceptor for CLE perception. Partly involved in MpCLE1/TDIF signaling.
Takahashi, G., et al. (2023) · Current Biology  research experimental comparator
CIK co-receptor; CLE signaling component.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g14210.1 chr7:17935902..17941965 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g14210.2 chr7:17936407..17941583 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g14210 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g14210 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.