Mp7g15290
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.60.40.1820 | - |
| SUPERFAMILY | SSF117070 | LEA14-like |
| Pfam | PF03168 | Late embryogenesis abundant protein |
| PANTHER | PTHR31234 | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY |
| MapolyID | Mapoly0009s0213 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like57 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g15290 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g15290.1 GCTCGCAGCC GCCGGTCAAA AAGGACTTTC CATCGAGAGG GCGAGGCAGG CAGGCAGGCA GACAGGCCGA GAGCAAGAGG AAAAGAGGAA GACGAAGCTT CATCTCCAAA CAAGCGCGTG CATGCGAGGC AAGACTAGGG TCGCAGGCGG ATTGGAAATC GTTTGAGTGA GTGATGGCAG ATGGAATCGG ATTGACCGAT GATGCTCGAG GGTAAAAGAA AAAAGGGCCT GTGATTGTGT AAGCGGATTG ACGGAGCTGA GTTTGAGTGC CTGTGGAAAT TCTTTTCGTA AGTGGAGTGA GTGAGGGTGC GGAGGAACTC GTCGGTCGGT CAGTCGAGGC CATGGGAGTA GGATTGCTGT GGGCATCGGC TGAAGACATA GCTCGCAACA AGCCGGCTGT GAGATCCGCT TATCGTTGCC TGTTGAGGGC ATTGAATCTG GAGAAAGTGC CTCTGTCTCT CGCCGCCAGG GAGTCCAAAA AGGCCGAAGT GCGCCACATC TTCGAGCTCG CCGCATCCGA GCGCTCCGTG CACAACATCC GAGAGCTTCT TGACATCGCT CGCCACTCGG TTTCTCTCTT GGAGAAGGGG GAGATTCCCG GGGAGTCCCG TTGAGTCATC ACCATCGCAT TCGCCATCGT CGTCGTCGTT ACTCTCCGTC CCTGATTGAT TTCGGCGGGT GTTTGGTTGA TTTGAGAGCT GTGTTTCGAT TCCACTATCA ATAAATTACG ATGTCTAAAC CTAACGAGGA CTACGTGTAT GGAATTCCAG CTTACCCTCA TTATGTTCTT GTTCCTGTTC CTGAGAGGTA TCGGTCTCGT GCACCTTGCT GGGGCGTGTG GTCAGCTTGC CGAGTTCTAA CGGCAGCGAT CTTTCTTTTG TCGATGGTTG GAACTGGATT CATATTGTAT CCGAAAGAGC CTGTGATGGA TCTTCGCAGA GTCACTCTGG AGGATATCAG TTTTCACATG GATGATGGGA AGTCAATCAT ACCTAGTGTC ACTCTGGATT TGAGTCTCAG CCTGCTGCTT AAGATAACGA ATACCAATTT CTTCGGAGTC GATTACGATA AGGTAGTTGT ACACATTTCC TACAGAGGAG ACGAGCTCGG GAAAGTGCAA TCTCAAGGCG GTCTGGTCCC TGCGCGGAGT GTTGCTATGG TTGCTGCCCT GCTTGATCTC AAGGGGACAC AACTGATGAA ACATGTGTCT GACATAATTG TGGACGTAGC TAACAACGAA GTTCCAATCG AGACGAGGAC AGTGTTTTCG GGAGTAGTGC AAATTATGAT GTTCAGGCCA CATATAGAGG TATGTAATTG AACTTTCTTA CTTCCTAGAT CTTTACTTGA ATGAGCTTCC GGTTTCAGGT TGAGAATTGT GTGTGGACAA GGCATTGCAG TTGCAGTTTA TTGTAATCAG GAATTTGGCA TCTGCAATCT TGCGCATTCT GTGAGTGAAA GTGAGTTCCA GCTACACCGT TCAGCACACT CGGACAAAAG GGGGGTCTCC TTTTTGCTGC ACTGCAATGC CAAGCATTGT TGAAGTGAGG GATTACTGGT CACCGAAAAT CTCTCATGTC GCGCATGGAT GGGATGTATT CGTCCGCATT CAGACTTGCC TACGCGCGAT TTAATGCAAT TTCTTCGTCT GCATTGCTTT TGCAGGTGAC TGTGTACTGC AAGATGCTTG TGGATCCCAA ATCGAAGCTT GTTCTGAACA AAGATTGCTC CCTCTTGTAA GCCTTTAAGC TCGGTATATC ACTGAATGCT CTTGTATGTA CATGTGACCT TAACTATTGC GAGAAACTTG CCCAAGTCGA ACAAATCAGC CGTGCCATAT ATGTACAGAC CCAGCTGTGA AGTTTCTCTC CTCTGCTGCT GCTACTTCGC CAGGGCTCTG CGTTTCGGTA GGTGGAAGTA TACCATGTAA GAGTTGGTGT CATACTCGTA TTTGACTCGT AGATTATATA CCTCTGATCT TAGTCCGCTG GGGAGGTAAA TTAGCATAAC TTCGCCCGAA GAGCTACCAT TGGATGGCGG GATGTTGGAG GCTGGGCTCC GTAGTCTCAC ATGAATACTA GAAGGGATGC AGTCTAAAGC TGCGGGTACG AAGAAAGAAT GCTCCCAACA TGTATAGGCG GTTGTGAAGA GACCTGCCCC GATTGACGAC GGGCGACTTC CTTACGAGCT AGCTTTGGTC AACTCTGGTT CTGTAATCCT TGTTGTTGAC AGCAGGGAGT TGTACGTGTA TGGGAGTTCG AATCCTGTAT ACGACATGCA CCTCTCCAGG CCACACCATT TCTACTGGGA GCTTACGAAG TGGTGGGGGG AGTTTACGTC TGGTTCGATC ACCACTAGCC TCTACCTGAA GTCACTGGTG GCTCCACTGC TGTCAATATT ATGAGAGAGT GTGTACAACA TTAATGGTCC TTTTTATACA TACCGAAGAA TTTGTC |
mRNA UTR + CDS |
| >Mp7g15290.1 GCTCGCAGCC GCCGGTCAAA AAGGACTTTC CATCGAGAGG GCGAGGCAGG CAGGCAGGCA GACAGGCCGA GAGCAAGAGG AAAAGAGGAA GACGAAGCTT CATCTCCAAA CAAGCGCGTG CATGCGAGGC AAGACTAGGG TCGCAGGCGG ATTGGAAATC GTTTGAGTGA GTGATGGCAG ATGGAATCGG ATTGACCGAT GATGCTCGAG GGTAAAAGAA AAAAGGGCCT GTGATTGTGT AAGCGGATTG ACGGAGCTGA GTTTGAGTGC CTGTGGAAAT TCTTTTCGTA AGTGGAGTGA GTGAGGGTGC GGAGGAACTC GTCGGTCGGT CAGTCGAGGC CATGGGAGTA GGATTGCTGT GGGCATCGGC TGAAGACATA GCTCGCAACA AGCCGGCTGT GAGATCCGCT TATCGTTGCC TGTTGAGGGC ATTGAATCTG GAGAAAGTGC CTCTGTCTCT CGCCGCCAGG GAGTCCAAAA AGGCCGAAGT GCGCCACATC TTCGAGCTCG CCGCATCCGA GCGCTCCGTG CACAACATCC GAGAGCTTCT TGACATCGCT CGCCACTCGG TTTCTCTCTT GGAGAAGGGG GAGATTCCCG GGGAGTCCCG TTGAGTCATC ACCATCGCAT TCGCCATCGT CGTCGTCGTT ACTCTCCGTC CCTGATTGAT TTCGGCGGGT GTTTGGTTGA TTTGAGAGCT GTGTTTCGAT TCCACTATCA ATAAATTACG ATGTCTAAAC CTAACGAGGA CTACGTGTAT GGAATTCCAG CTTACCCTCA TTATGTTCTT GTTCCTGTTC CTGAGAGGTA TCGGTCTCGT GCACCTTGCT GGGGCGTGTG GTCAGCTTGC CGAGTTCTAA CGGCAGCGAT CTTTCTTTTG TCGATGGTTG GAACTGGATT CATATTGTAT CCGAAAGAGC CTGTGATGGA TCTTCGCAGA GTCACTCTGG AGGATATCAG TTTTCACATG GATGATGGGA AGTCAATCAT ACCTAGTGTC ACTCTGGATT TGAGTCTCAG CCTGCTGCTT AAGATAACGA ATACCAATTT CTTCGGAGTC GATTACGATA AGGTAGTTGT ACACATTTCC TACAGAGGAG ACGAGCTCGG GAAAGTGCAA TCTCAAGGCG GTCTGGTCCC TGCGCGGAGT GTTGCTATGG TTGCTGCCCT GCTTGATCTC AAGGGGACAC AACTGATGAA ACATGTGTCT GACATAATTG TGGACGTAGC TAACAACGAA GTTCCAATCG AGACGAGGAC AGTGTTTTCG GGAGTAGTGC AAATTATGAT GTTCAGGCCA CATATAGAGG TGACTGTGTA CTGCAAGATG CTTGTGGATC CCAAATCGAA GCTTGTTCTG AACAAAGATT GCTCCCTCTT GTAAGCCTTT AAGCTCGGTA TATCACTGAA TGCTCTTGTA TGTACATGTG ACCTTAACTA TTGCGAGAAA CTTGCCCAAG TCGAACAAAT CAGCCGTGCC ATATATGTAC AGACCCAGCT GTGAAGTTTC TCTCCTCTGC TGCTGCTACT TCGCCAGGGC TCTGCGTTTC GGTAGGTGGA AGTATACCAT GTAAGAGTTG GTGTCATACT CGTATTTGAC TCGTAGATTA TATACCTCTG ATCTTAGTCC GCTGGGGAGG TAAATTAGCA TAACTTCGCC CGAAGAGCTA CCATTGGATG GCGGGATGTT GGAGGCTGGG CTCCGTAGTC TCACATGAAT ACTAGAAGGG ATGCAGTCTA AAGCTGCGGG TACGAAGAAA GAATGCTCCC AACATGTATA GGCGGTTGTG AAGAGACCTG CCCCGATTGA CGACGGGCGA CTTCCTTACG AGCTAGCTTT GGTCAACTCT GGTTCTGTAA TCCTTGTTGT TGACAGCAGG GAGTTGTACG TGTATGGGAG TTCGAATCCT GTATACGACA TGCACCTCTC CAGGCCACAC CATTTCTACT GGGAGCTTAC GAAGTGGTGG GGGGAGTTTA CGTCTGGTTC GATCACCACT AGCCTCTACC TGAAGTCACT GGTGGCTCCA CTGCTGTCAA TATTATGAGA GAGTGTGTAC AACATTAATG GTCCTTTTTA TACATACCGA AGAATTTGTC |
CDS |
| >Mp7g15290.1 ATGTCTAAAC CTAACGAGGA CTACGTGTAT GGAATTCCAG CTTACCCTCA TTATGTTCTT GTTCCTGTTC CTGAGAGGTA TCGGTCTCGT GCACCTTGCT GGGGCGTGTG GTCAGCTTGC CGAGTTCTAA CGGCAGCGAT CTTTCTTTTG TCGATGGTTG GAACTGGATT CATATTGTAT CCGAAAGAGC CTGTGATGGA TCTTCGCAGA GTCACTCTGG AGGATATCAG TTTTCACATG GATGATGGGA AGTCAATCAT ACCTAGTGTC ACTCTGGATT TGAGTCTCAG CCTGCTGCTT AAGATAACGA ATACCAATTT CTTCGGAGTC GATTACGATA AGGTAGTTGT ACACATTTCC TACAGAGGAG ACGAGCTCGG GAAAGTGCAA TCTCAAGGCG GTCTGGTCCC TGCGCGGAGT GTTGCTATGG TTGCTGCCCT GCTTGATCTC AAGGGGACAC AACTGATGAA ACATGTGTCT GACATAATTG TGGACGTAGC TAACAACGAA GTTCCAATCG AGACGAGGAC AGTGTTTTCG GGAGTAGTGC AAATTATGAT GTTCAGGCCA CATATAGAGG TGACTGTGTA CTGCAAGATG CTTGTGGATC CCAAATCGAA GCTTGTTCTG AACAAAGATT GCTCCCTCTT GTAA |
Protein |
| >Mp7g15290.1 MSKPNEDYVY GIPAYPHYVL VPVPERYRSR APCWGVWSAC RVLTAAIFLL SMVGTGFILY PKEPVMDLRR VTLEDISFHM DDGKSIIPSV TLDLSLSLLL KITNTNFFGV DYDKVVVHIS YRGDELGKVQ SQGGLVPARS VAMVAALLDL KGTQLMKHVS DIIVDVANNE VPIETRTVFS GVVQIMMFRP HIEVTVYCKM LVDPKSKLVL NKDCSLL |