Mp7g15830



Description

Annotation

Database ID Description
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
Gene3D G3DSA:2.120.10.30 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00326 Prolyl oligopeptidase family
Pfam PF19283 Acylamino-acid-releasing enzyme, N-terminal domain
Pfam PF07676 WD40-like Beta Propeller Repeat
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
PANTHER PTHR42776 SERINE PEPTIDASE S9 FAMILY MEMBER
FunFam G3DSA:3.40.50.1820:FF:000146 Acylamino-acid-releasing enzyme
ProSitePatterns PS00708 Prolyl endopeptidase family serine active site.
SUPERFAMILY SSF82171 DPP6 N-terminal domain-like
KEGG K01303 acylaminoacyl-peptidase [EC:3.4.19.1]
KOG KOG2100 Dipeptidyl aminopeptidase; N-term missing; [O]
MapolyID Mapoly0111s0036 -
GO GO:0008236 serine-type peptidase activity
GO GO:0006508 proteolysis
GO GO:0004252 serine-type endopeptidase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Marchantia AARE ortholog identified by BLASTP using AtAARE as query; three splice variants annotated (Mapoly0111s0036.1 encodes a 97-aa N-terminal extension), used only for cross-species phylogenetic comparison.

0 core 1 peripheral

Hoernstein, S. N. W., et al. (2023) · Communications Biology  research sequence comparator
Marchantia AARE ortholog identified by BLASTP using AtAARE as query; three splice variants annotated (Mapoly0111s0036.1 encodes a 97-aa N-terminal extension), used only for cross-species phylogenetic comparison.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g15830.1 chr7:19661098..19668360 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g15830.2 chr7:19661098..19668360 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g15830.3 chr7:19661985..19668360 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g15830 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g15830 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.