Mp7g17040



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.12660 -
Pfam PF00656 Caspase domain
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR48104 METACASPASE-4
Pfam PF06943 LSD1 zinc finger
KEGG K22684 metacaspase-1 [EC:3.4.22.-]
KOG KOG1546 Metacaspase involved in regulation of apoptosis; [DO]
MapolyID Mapoly0051s0042 -
GO GO:0004197 cysteine-type endopeptidase activity
GO GO:0006508 proteolysis

Nomenclature

Gene symbol Product Transcript ID Status
MpMCA-I protease, metacaspase type I Published

Transcript models

Transcript ID Location Sequences Extract region
Mp7g17040.1 chr7:21310338..21314715 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g17040 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g17040 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.