Mp7g18370



Description

Annotation

Database ID Description
PANTHER PTHR30480 BETA-HEXOSAMINIDASE-RELATED
Gene3D G3DSA:3.20.20.300 -
Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain
SUPERFAMILY SSF51445 (Trans)glycosidases
KEGG K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
MapolyID Mapoly0102s0003 -
GO GO:0005975 carbohydrate metabolic process
GO GO:0009254 peptidoglycan turnover
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

Nomenclature

Gene symbol Product Transcript ID Status
MpGH3.8 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp7g18370.1 chr7:22995601..22997575 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g18370.2 chr7:22995601..22997602 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g18370.3 chr7:22995601..22997602 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g18370 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g18370 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.