Mp7g18820



Description

Annotation

Database ID Description
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
PRINTS PR00019 Leucine-rich repeat signature
SMART SM00220 serkin_6
Pfam PF08263 Leucine rich repeat N-terminal domain
FunFam G3DSA:3.30.200.20:FF:000292 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
FunFam G3DSA:3.80.10.10:FF:000233 Leucine-rich repeat receptor-like protein kinase TDR
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
FunFam G3DSA:3.80.10.10:FF:000041 LRR receptor-like serine/threonine-protein kinase ERECTA
FunFam G3DSA:3.80.10.10:FF:000129 Leucine-rich repeat receptor-like kinase
SUPERFAMILY SSF52058 L domain-like
PANTHER PTHR48056 LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED
Pfam PF00069 Protein kinase domain
Pfam PF00560 Leucine Rich Repeat
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS51450 Leucine-rich repeat profile.
FunFam G3DSA:3.80.10.10:FF:000416 Probable leucine-rich repeat receptor-like protein kinase At5g63930
SMART SM00369 LRR_typ_2
Pfam PF13855 Leucine rich repeat
FunFam G3DSA:3.80.10.10:FF:000270 Putative LRR receptor-like serine/threonine-protein kinase
ProSiteProfiles PS50011 Protein kinase domain profile.
FunFam G3DSA:1.10.510.10:FF:000276 LRR receptor-like serine/threonine-protein kinase RCH1
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP); C-term missing; [T]
MapolyID Mapoly0067s0095 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRGI2 LRR-RLK, peptide receptor Provisional

Associated Literature (AI-based literature mining, Beta-version)

LRR-RLK, peptide receptor (from nomenclature)

0 core 1 peripheral

Liu, W., et al. (2024a) · Cell Reports  research experimental background
RGF1 INSENSITIVE2 peptide-hormone receptor gene; examined alongside MpANT meristem targets (Fig 2B,2G).

Transcript models

Transcript ID Location Sequences Extract region
Mp7g18820.1 chr7:23692219..23699064 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g18820 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g18820 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.