Mp8g00770
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00656 | amb_all |
| Pfam | PF00544 | Pectate lyase |
| PRINTS | PR00807 | Pollen allergen Amb family signature |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| Gene3D | G3DSA:2.160.20.10 | - |
| PANTHER | PTHR31683 | PECTATE LYASE 18-RELATED |
| KEGG | K01728 | pectate lyase [EC:4.2.2.2] |
| MapolyID | Mapoly0064s0120 | - |
| GO | GO:0030570 | pectate lyase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPL1.5 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g00770 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g00770.1 GACTTACACA ATCAAGTTTC GATTACCCTC TTCTGAGAGA TTCCGGATCT TTGTCCGTGG ACTTCTGTCT ATAAGTGTGG AGAATGGCGG ATGGCGATTC TCAGTTCAAA CTGGCTCTCG TAGAATCATT CTCCTCGTTG AGAAGAAGGC CTTTGGGCTG CCCAGAGAGA GAAGAAGAAG GAGTCGGAGA CCAGTCATGA GTCCCTGCAG CATGTCGGCC GCCGCACTCA TGTGCCTGAC GGTGCTGCTC GTCTTCTCGA GCGCAGCCGT CTCTGCACAA CCGATCGATA TCGACGTCGA GTTGGACGAT GTCATGGACT ACAACTCGAC GGACCTCGTG GACCCGAAGG ATCTCGAGAC TTCTGACCCC GAATTCACAG TCACTCTGCT GAACGACGAT CTGGAAGGCA CAGCGACGAG CACGAGCTCG AGCCCCGTGT TCGACCTCCT CAAAGTCTCC GACTTTTCCC TCGAGACTAA CACGTCGGAC AATGCTCTAG AACTCGCGGC CAAGAAGAAG CCATCGCGAT GTGGCAAAGG GAATCCCATG GACGACTGCT GGCAATGTGA CTCCCAGTGG CACAAGCATC GACAGAACCT TGCATTCTGC GCCATAGGAT ATGGCAGAAA CGCCATCGGG GGTCTCAATG GAGCGACATA CATCGTGACC GACCCTGGAA ATGATAATCC CACGGACCCA CGTCCTGGCA CTCTTCGATG GGCCGTCGTC CAGGAGAGGC CGATGTGGAT CATCTTCGCT CGAGACATGA CGATTCGATT GAAGCAGGAG CTTATCATGA CGAGCTACAA AACGATCGAC GGGCGTGGAG TCAATGTCCA CATCGCCTAC GGCGCCTGCA TCACTCTGCA GCGAGTGCAC CATATCATCA TTCACGGAGT CCACATTCAC GATTGCAAAT CCACGGGCCC TGCGAGAGTT CGCAGCTCCG AGTCTCACGT GGGCAAGCGC GGGAAGACGG ACGGCGACGG CATCAGCATT ATGTCGTCCA GCAACATCTG GATCGACCAC AACTCCTTCT CCAAATGCAC CGACGGCCTC ATCGACGCCA TTCATGGCTC CGATCTGATC ACCATCTCCA ACAACTACTT CAGCAACCAC GACAAAGTCA TGCTGTTCGG TGCCAGCGAC GGCGACGGCA GCGAGGACAA GATCATGCAG ATCACCGTCG CCATGAACTA CTTCGGCCCC AAGCTCTGTC AACGAATGCC GCGGTAAAAG CTCGTTTGTG TCCCCTGTGC ATACTGCATT GCACCTCCCC TCGTGTCATC GACTCCTCCT CCTCCTCCTC CTTCTTTCGC CGCCACTGAT TGATTTGGTG ATCGATTCCA TGTCCAGATG TCGCTTTGGA ACATTTCACG TCTTCAACAA CTTCTACTCC GGCTGGACTC AGTATGCAAT CGGCGGGAGC TCGAGCCCCA CGGTCAACAG CGAGGGGAAC TATTTCAAGG CCTCGAGAGT GAAGCGGGTA CTCCTCGGAG GAATCTCCAT CCCACGCCGT TTACGAGCTG CAGACGTGAT TTCTACTTGC TATGGCTTGG CGTGGTTTGG AATTCATACA CATTGTGATG AATGTAATGT CACTCACATT CGGATTTTAC TGACTGCAGG CGATCAAGCA TCTCGGCAAG GGCAATGGCA ACTGGCGGAC GTATGGAGAT AAATTCGTCA ACGGTGCGTA TTTCAGCCGA GCGGGAGCTC AAGTGAGTTC ATCTGTGTAC AACGCAGCGA AGTCTTTCAG TGCCAGGCCT GCGTACATGG TGCCTCGATT GACTGCCGGC GCTGGACCCA CGGGACGGTC GGTCTGAGGT TCCATCGAGT CACAGTGTCG AGAGAACTCT CTGCGACCGG AAGCTTCGTT CGTTTTCTGA TCATGCTGAT GTGAAGATTC AGCGACAACT TACATTTAGA CAGTTCTTTG GACCTGTCAG ATGTGCAACC TGGAATCTTG TGCGGATTCT GATGAGTTGA ATAGCCGTAG ACTGAGATCT GTCTACAGCA CGTGTATATC CCGACAGTAG CAGATTTAGT GCAATCACAG GCACACCAGA GCTGGCCTTC GGCACCGATG TCGGCCGGGT GCATTTGAGC GCTTTATCGT CATTCCAGAG TTTCCGAGAG ACTTTAGCAT TTTCTATTTC CGATCTCTCT TGGAGATCGG AGTGGAACCT TGCAACTGTA AACAATAATA AGAAACATAC AATGTCTCTC CATCTCGATC CTTATTGTTG GCC |
mRNA UTR + CDS |
| >Mp8g00770.1 GACTTACACA ATCAAGTTTC GATTACCCTC TTCTGAGAGA TTCCGGATCT TTGTCCGTGG ACTTCTGTCT ATAAGTGTGG AGAATGGCGG ATGGCGATTC TCAGTTCAAA CTGGCTCTCG TAGAATCATT CTCCTCGTTG AGAAGAAGGC CTTTGGGCTG CCCAGAGAGA GAAGAAGAAG GAGTCGGAGA CCAGTCATGA GTCCCTGCAG CATGTCGGCC GCCGCACTCA TGTGCCTGAC GGTGCTGCTC GTCTTCTCGA GCGCAGCCGT CTCTGCACAA CCGATCGATA TCGACGTCGA GTTGGACGAT GTCATGGACT ACAACTCGAC GGACCTCGTG GACCCGAAGG ATCTCGAGAC TTCTGACCCC GAATTCACAG TCACTCTGCT GAACGACGAT CTGGAAGGCA CAGCGACGAG CACGAGCTCG AGCCCCGTGT TCGACCTCCT CAAAGTCTCC GACTTTTCCC TCGAGACTAA CACGTCGGAC AATGCTCTAG AACTCGCGGC CAAGAAGAAG CCATCGCGAT GTGGCAAAGG GAATCCCATG GACGACTGCT GGCAATGTGA CTCCCAGTGG CACAAGCATC GACAGAACCT TGCATTCTGC GCCATAGGAT ATGGCAGAAA CGCCATCGGG GGTCTCAATG GAGCGACATA CATCGTGACC GACCCTGGAA ATGATAATCC CACGGACCCA CGTCCTGGCA CTCTTCGATG GGCCGTCGTC CAGGAGAGGC CGATGTGGAT CATCTTCGCT CGAGACATGA CGATTCGATT GAAGCAGGAG CTTATCATGA CGAGCTACAA AACGATCGAC GGGCGTGGAG TCAATGTCCA CATCGCCTAC GGCGCCTGCA TCACTCTGCA GCGAGTGCAC CATATCATCA TTCACGGAGT CCACATTCAC GATTGCAAAT CCACGGGCCC TGCGAGAGTT CGCAGCTCCG AGTCTCACGT GGGCAAGCGC GGGAAGACGG ACGGCGACGG CATCAGCATT ATGTCGTCCA GCAACATCTG GATCGACCAC AACTCCTTCT CCAAATGCAC CGACGGCCTC ATCGACGCCA TTCATGGCTC CGATCTGATC ACCATCTCCA ACAACTACTT CAGCAACCAC GACAAAGTCA TGCTGTTCGG TGCCAGCGAC GGCGACGGCA GCGAGGACAA GATCATGCAG ATCACCGTCG CCATGAACTA CTTCGGCCCC AAGCTCTGTC AACGAATGCC GCGATGTCGC TTTGGAACAT TTCACGTCTT CAACAACTTC TACTCCGGCT GGACTCAGTA TGCAATCGGC GGGAGCTCGA GCCCCACGGT CAACAGCGAG GGGAACTATT TCAAGGCCTC GAGAGTGAAG CGGGCGATCA AGCATCTCGG CAAGGGCAAT GGCAACTGGC GGACGTATGG AGATAAATTC GTCAACGGTG CGTATTTCAG CCGAGCGGGA GCTCAAGTGA GTTCATCTGT GTACAACGCA GCGAAGTCTT TCAGTGCCAG GCCTGCGTAC ATGGTGCCTC GATTGACTGC CGGCGCTGGA CCCACGGGAC GGTCGGTCTG AGGTTCCATC GAGTCACAGT GTCGAGAGAA CTCTCTGCGA CCGGAAGCTT CGTTCGTTTT CTGATCATGC TGATGTGAAG ATTCAGCGAC AACTTACATT TAGACAGTTC TTTGGACCTG TCAGATGTGC AACCTGGAAT CTTGTGCGGA TTCTGATGAG TTGAATAGCC GTAGACTGAG ATCTGTCTAC AGCACGTGTA TATCCCGACA GTAGCAGATT TAGTGCAATC ACAGGCACAC CAGAGCTGGC CTTCGGCACC GATGTCGGCC GGGTGCATTT GAGCGCTTTA TCGTCATTCC AGAGTTTCCG AGAGACTTTA GCATTTTCTA TTTCCGATCT CTCTTGGAGA TCGGAGTGGA ACCTTGCAAC TGTAAACAAT AATAAGAAAC ATACAATGTC TCTCCATCTC GATCCTTATT GTTGGCC |
CDS |
| >Mp8g00770.1 ATGAGTCCCT GCAGCATGTC GGCCGCCGCA CTCATGTGCC TGACGGTGCT GCTCGTCTTC TCGAGCGCAG CCGTCTCTGC ACAACCGATC GATATCGACG TCGAGTTGGA CGATGTCATG GACTACAACT CGACGGACCT CGTGGACCCG AAGGATCTCG AGACTTCTGA CCCCGAATTC ACAGTCACTC TGCTGAACGA CGATCTGGAA GGCACAGCGA CGAGCACGAG CTCGAGCCCC GTGTTCGACC TCCTCAAAGT CTCCGACTTT TCCCTCGAGA CTAACACGTC GGACAATGCT CTAGAACTCG CGGCCAAGAA GAAGCCATCG CGATGTGGCA AAGGGAATCC CATGGACGAC TGCTGGCAAT GTGACTCCCA GTGGCACAAG CATCGACAGA ACCTTGCATT CTGCGCCATA GGATATGGCA GAAACGCCAT CGGGGGTCTC AATGGAGCGA CATACATCGT GACCGACCCT GGAAATGATA ATCCCACGGA CCCACGTCCT GGCACTCTTC GATGGGCCGT CGTCCAGGAG AGGCCGATGT GGATCATCTT CGCTCGAGAC ATGACGATTC GATTGAAGCA GGAGCTTATC ATGACGAGCT ACAAAACGAT CGACGGGCGT GGAGTCAATG TCCACATCGC CTACGGCGCC TGCATCACTC TGCAGCGAGT GCACCATATC ATCATTCACG GAGTCCACAT TCACGATTGC AAATCCACGG GCCCTGCGAG AGTTCGCAGC TCCGAGTCTC ACGTGGGCAA GCGCGGGAAG ACGGACGGCG ACGGCATCAG CATTATGTCG TCCAGCAACA TCTGGATCGA CCACAACTCC TTCTCCAAAT GCACCGACGG CCTCATCGAC GCCATTCATG GCTCCGATCT GATCACCATC TCCAACAACT ACTTCAGCAA CCACGACAAA GTCATGCTGT TCGGTGCCAG CGACGGCGAC GGCAGCGAGG ACAAGATCAT GCAGATCACC GTCGCCATGA ACTACTTCGG CCCCAAGCTC TGTCAACGAA TGCCGCGATG TCGCTTTGGA ACATTTCACG TCTTCAACAA CTTCTACTCC GGCTGGACTC AGTATGCAAT CGGCGGGAGC TCGAGCCCCA CGGTCAACAG CGAGGGGAAC TATTTCAAGG CCTCGAGAGT GAAGCGGGCG ATCAAGCATC TCGGCAAGGG CAATGGCAAC TGGCGGACGT ATGGAGATAA ATTCGTCAAC GGTGCGTATT TCAGCCGAGC GGGAGCTCAA GTGAGTTCAT CTGTGTACAA CGCAGCGAAG TCTTTCAGTG CCAGGCCTGC GTACATGGTG CCTCGATTGA CTGCCGGCGC TGGACCCACG GGACGGTCGG TCTGA |
Protein |
| >Mp8g00770.1 MSPCSMSAAA LMCLTVLLVF SSAAVSAQPI DIDVELDDVM DYNSTDLVDP KDLETSDPEF TVTLLNDDLE GTATSTSSSP VFDLLKVSDF SLETNTSDNA LELAAKKKPS RCGKGNPMDD CWQCDSQWHK HRQNLAFCAI GYGRNAIGGL NGATYIVTDP GNDNPTDPRP GTLRWAVVQE RPMWIIFARD MTIRLKQELI MTSYKTIDGR GVNVHIAYGA CITLQRVHHI IIHGVHIHDC KSTGPARVRS SESHVGKRGK TDGDGISIMS SSNIWIDHNS FSKCTDGLID AIHGSDLITI SNNYFSNHDK VMLFGASDGD GSEDKIMQIT VAMNYFGPKL CQRMPRCRFG TFHVFNNFYS GWTQYAIGGS SSPTVNSEGN YFKASRVKRA IKHLGKGNGN WRTYGDKFVN GAYFSRAGAQ VSSSVYNAAK SFSARPAYMV PRLTAGAGPT GRSV |