Mp8g02970



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00086 homeodomain
Pfam PF05920 Homeobox KN domain
Gene3D G3DSA:1.10.10.60 -
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG2146 Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain); N-term missing; [AR]
MapolyID Mapoly0012s0090 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBELL3 transcription factor, HD, homeodomain protein Published
MpHD4 transcription factor, HD, homeodomain protein Published

Associated Literature (AI-based literature mining, Beta-version)

Antheridiophore (male)-specific BELL partner of MpKNOX1; Mpbell3/4 double knockouts cause partial karyogamy failure (~half of zygotes). Paternally inherited MpBELL3/4 recruit maternal MpKNOX1 to the pronuclei, while maternal MpBELL3/4 also contribute.

2 core 2 peripheral

Dierschke, T., et al. (2021) · eLife  research experimental subject
Gamete-expressed BELL gene producing a full-length transcript in antheridia and a shorter single-homeodomain variant in egg cells from distinct promoters.
Hisanaga, T., et al. (2021) · eLife  research experimental subject
Antheridiophore (male)-specific BELL partner of MpKNOX1; Mpbell3/4 double knockouts cause partial karyogamy failure (~half of zygotes). Paternally inherited MpBELL3/4 recruit maternal MpKNOX1 to the pronuclei, while maternal MpBELL3/4 also contribute.
Dierschke, T., et al. (2024) · Current Biology  research sequence comparator
BELL family member (comparison).
Frangedakis, E., et al. (2020) · New Phytologist  review citation background
paternal BELL

Transcript models

Transcript ID Location Sequences Extract region
Mp8g02970.1 chr8:3257395..3279241 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g02970 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g02970 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.