Mp8g05750



Description

Annotation

Database ID Description
ProSiteProfiles PS51273 Glutamine amidotransferase type 1 domain profile.
ProSiteProfiles PS51130 PdxT/SNO family profile.
Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT].
NCBIfam TIGR03800 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
Gene3D G3DSA:3.40.50.880 -
PANTHER PTHR31559 PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO
FunFam G3DSA:3.40.50.880:FF:000038 Predicted protein
Pfam PF01174 SNO glutamine amidotransferase family
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like
ProSitePatterns PS01236 PdxT/SNO family family signature.
CDD cd01749 GATase1_PB
KEGG K08681 pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
KOG KOG3210 Imidazoleglycerol-phosphate synthase subunit H-like; [H]
MapolyID Mapoly0081s0077 -
GO GO:1903600 glutaminase complex
GO GO:0008614 pyridoxine metabolic process
GO GO:0042819 vitamin B6 biosynthetic process
GO GO:0042823 pyridoxal phosphate biosynthetic process
GO GO:0004359 glutaminase activity
GO GO:0005829 cytosol

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

UVB-induced DEG, pyridoxal 5'-phosphate synthase subunit (annotation).

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced DEG, pyridoxal 5'-phosphate synthase subunit (annotation).

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05750.1 chr8:7937316..7939950 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g05750.2 chr8:7937315..7939950 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g05750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g05750 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.