Mp8g08650
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| FunFam | G3DSA:1.25.40.10:FF:000530 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| PANTHER | PTHR47447 | OS03G0856100 PROTEIN |
| Pfam | PF13041 | PPR repeat family |
| Pfam | PF12854 | PPR repeat |
| SUPERFAMILY | SSF48452 | TPR-like |
| Pfam | PF13812 | Pentatricopeptide repeat domain |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; [S] |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| MapolyID | Mapoly0063s0054 | - |
| GO | GO:0005515 | protein binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_41 | Pentatricopeptide repeat proteins | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g08650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g08650.1 AACAATGAAC GCGCGAGGGC CCAAACCTGA TTGAGCACCG CGACAGGGCA GGGCAGGGGC GTCGCTGCAA GGCCGTGTTG CTTTGGGCAG GCGAGAGAGC CCTCGGTCTG ATTACAGATT GCTGTCCCTT TTCGCTCCTG GTGAGGTGGA GAGGTGTGGA GTAGTTTCTA GGAGTGTGTA GAGAATTCGA GGAGTGAGGC GGAAGAGTGC GAAGCGCGGA GGCGGAGGTC TCATGTAGGA GGGGAATTGG TGGGCGGATG ATGGTGGAGA GAAGCTATGG CGAGCAACCC CGCAGCACCG GTGCTGTCTC CACCACCGCT TCTACCTCCT AGACCCGGGT ACTGGCGACC ACCACCAGCG AATGTCGCAT TTTCGGAGAG TAGTTTTGGT CGCCATGGAA AGCTGTCGGC AATTTTGGAG CCTGTGATCG AAGCGAGGCA GAATAGGGCC AAGGAGCAAC AGCAGTTGCT GCAGCAGGGG TGGGGAGCGG TGGAAGGGCG GCCCGAGGAA GACAAGCGCC AGGGGAGTCC TACTTCTGCA GCAGCTGGGG CTCGGAATGA GAAGGATGCC ACCCATGCCA CCCATGTCCC GACCTGGAAA AAGTACGACA AAGATGGCAA TGGTTCGACC GGTGCCAAGC AAGCGCCGGA GATTGGCTCT GGAGGAGATT GGAGAGAAGA GGCGAAGGCC GCCACCTCTT ACCCAGTCGG AGGTTCTCTG CAGAGAGCGA ACAAGCGCCG AATTGGGAAG CACCGCGACG AGAAGCTGCC GTGGCGAACA GGATTGTCTG CCCATGGCGT GCTTCTTTTC AACGCCATTT CCGAACTGGA AGGAGCTCAG AGTCCGGAAC CTCTCTTGGA TGCAGCTGAC GACACGCTCT CGTTGCATGA CTTGCTGTGT ATGATAAAGA CTTTTGGAAA TGATGGGAGG TGGCAGAAAG CCCTTCAGGT ATTCACTTGG ATGCGAAAGC ACGAGAAATT GAACCCGGAC GAGCCCACCA TAGCGAGTAT GTTGAGAATT CTGGGCCGGG AAATGCAGCT CACGACTGCC ATAGAGATTT TTGAGAGCCT GAAGGGTGAG GGATATGGGC TGAATGTATA CTCCTACACA TCTCTCATTA GTGCGTACGC ACGCAGCGGA AGATCCCAAG ACGCCCTTGC ACTTTTCGAG AGGATGAAGG AGGAAGGCTG CAGGCCGAAC TTGGTGACCT ACAATGTCGT AATCGACATT TACGGGAAGC GAGGTCGTTC TTGGGACAAA ATTCAGGATT TAATTGTCGA ACTGAGGAGC CAGGGATTCC GACCGGACAG GTACAGCTAC AATACGATGA TCAGTGCCTG CGCCCGGGAG TCCTTGTGCA AAGAAGCCAG GGGTATATTT GAGGAGATGA AAGAGGCAGG ATGTAACCCG GACAAGGTCA CCTACAATGC GCTTCTGGAT GTTTACGGGA AGGCAGGTTG GCACAAAGAA GCATCCAGGG TTTTGCAGGA AATGGAGAAA GCAGGGTGCC CACCCAATAT CGTCACATAC AACGAGCTTC TGGCCGCTTA TGGGAAATCC GGGCTCCACG CTGAAGCTTT GGCCCTGAAG CAGCAGATGG TCAGCAAGGG CATGGAGCCA GACGTCTTCA CTTACACTAG TCTTCTTTTC GGGTACAGTT CTGCCGGGCA GGACCGTCTG GCTATGGATA CTTATCTGGA AATGTGTGCA GGAGGGTGTA AGCCGAATTT GTTCACATTC AATTCTCTGA TAGACATGTT TGGGAAAAAG AAAATGTTCT CCGAGATGCT TCAAATTTTT GATGATCTTA GGGACAGTGG GTGCGCTCCG GATGTTGTTA CGTGGAACAG TATGTTAGGT GCCTATGGTA GGAATGGTAT GTACGAGGAG GTGGCTATGG TGTTCAAGAA TATGAAGAAG GCCGGGTGCA AGCCCGAGAA AGATACTTTC AACATTTTAA TCGATGCCTA TGGGAGATGT GGTTCAGCTG ATCAAGCAGT GGGAATTTAT CACGGGATGC AACGAGCAGG TTGCAGGCCA GATATCGCCA CTTTCAATGC CCTACTGGCA GCCTTCGCCA GGGAAGGACG ATGGGAATCC ACCGAAGAGC TTGTGATGGA AATGCAGAAG AAAGGCCACG AGCCCAACGA GGTATCATAC GCTTCAATGC TGCACGCTTA CGCGAATGGA GGTCAATTGG TGCGCCTCAA GAAGAAAGTC GAAGAAATCT ATGCCTTTTA CAACAACACT TTGGATACTG TCTTGTTGAA AACACTGGTT CTGGTTTACA GCAAGTGTAA CCTGTTGGAT GAGGCGGAGC TCGCATTTGC AGAGCTTCAA AGGAACGGAT ACACGCCCGA CCTCAATGCC TACAACGCAA TGATCACAGT TTACGGAAAG AGAGGACGAG TGGACAGGGC CACGGACTTG CTGGACACAC TTAAGCTAAA TGGGATTGCC CCAGATTTGG TCACCTACAA CGTTGTAATG AGTATGTACG GACGAGAAGG GATGTACAGA AAAGCAGAGG AGGTTTTGCG GGAGATGCAG CAAGCAGGAA CGAAGCCCAA CATGATTACT TACAATACGC TAATATTTGC GTATACCAAG CATGGACGCA TGGAGGATGC AGCTAGAATA TTTTTGGAAA TGGTGGATGC TGGATTGAAG CCCAACATAT TCACCTATAA TACTTTTGTT AGTAGCTATG CAAACCTTGG CATGTACACG GAAGCCATGA ATGTTCTGAA GTACATGAAA AGGAATGGTT GCAAGCCCGA GGAACTCACG TACCGAGGAC TTTTGGACGC TTACTGTAAA ATGGGCAAAG TTAGACAGGC TAATCAAATT CTTCAATGGA TCAAGGACAC TGATCCCGCT GTTGATAGAG CTGCTCTCAA GCGGATCTCC GCGCGGGTAG AAGCTTGGGG TACAAATCAC ACAAGATCTT GATCCATCAA CTTGTAAGTA ATTATGTTAA GAGAGGAGTT GCATCGCAGC TGTTCGCACT GAAGTGCTTT GTGTTTGATT CCCTCTTGTG TAAAATGTCG ATTTTCATGT GCAGAACTAC CATCCTTGTT GGGCACATGA CAGGAAATTA TTGAAGTCCA CGTTTGTGTA TGATCTTAGT TATCGCAATT TTTGTGAGGT GCAATTTATG TCGGACATTG AAGGGCTACG GTAATGAGAG TATTCAACAT ACATCAACTG TAACAGTCAT TATCTTTCCT TCTACAACCC TCGTGCTTTT CTAAGCTGCC TCTGAAACCA AGAACTAGCA GAG |
mRNA UTR + CDS |
| >Mp8g08650.1 AACAATGAAC GCGCGAGGGC CCAAACCTGA TTGAGCACCG CGACAGGGCA GGGCAGGGGC GTCGCTGCAA GGCCGTGTTG CTTTGGGCAG GCGAGAGAGC CCTCGGTCTG ATTACAGATT GCTGTCCCTT TTCGCTCCTG GTGAGGTGGA GAGGTGTGGA GTAGTTTCTA GGAGTGTGTA GAGAATTCGA GGAGTGAGGC GGAAGAGTGC GAAGCGCGGA GGCGGAGGTC TCATGTAGGA GGGGAATTGG TGGGCGGATG ATGGTGGAGA GAAGCTATGG CGAGCAACCC CGCAGCACCG GTGCTGTCTC CACCACCGCT TCTACCTCCT AGACCCGGGT ACTGGCGACC ACCACCAGCG AATGTCGCAT TTTCGGAGAG TAGTTTTGGT CGCCATGGAA AGCTGTCGGC AATTTTGGAG CCTGTGATCG AAGCGAGGCA GAATAGGGCC AAGGAGCAAC AGCAGTTGCT GCAGCAGGGG TGGGGAGCGG TGGAAGGGCG GCCCGAGGAA GACAAGCGCC AGGGGAGTCC TACTTCTGCA GCAGCTGGGG CTCGGAATGA GAAGGATGCC ACCCATGCCA CCCATGTCCC GACCTGGAAA AAGTACGACA AAGATGGCAA TGGTTCGACC GGTGCCAAGC AAGCGCCGGA GATTGGCTCT GGAGGAGATT GGAGAGAAGA GGCGAAGGCC GCCACCTCTT ACCCAGTCGG AGGTTCTCTG CAGAGAGCGA ACAAGCGCCG AATTGGGAAG CACCGCGACG AGAAGCTGCC GTGGCGAACA GGATTGTCTG CCCATGGCGT GCTTCTTTTC AACGCCATTT CCGAACTGGA AGGAGCTCAG AGTCCGGAAC CTCTCTTGGA TGCAGCTGAC GACACGCTCT CGTTGCATGA CTTGCTGTGT ATGATAAAGA CTTTTGGAAA TGATGGGAGG TGGCAGAAAG CCCTTCAGGT ATTCACTTGG ATGCGAAAGC ACGAGAAATT GAACCCGGAC GAGCCCACCA TAGCGAGTAT GTTGAGAATT CTGGGCCGGG AAATGCAGCT CACGACTGCC ATAGAGATTT TTGAGAGCCT GAAGGGTGAG GGATATGGGC TGAATGTATA CTCCTACACA TCTCTCATTA GTGCGTACGC ACGCAGCGGA AGATCCCAAG ACGCCCTTGC ACTTTTCGAG AGGATGAAGG AGGAAGGCTG CAGGCCGAAC TTGGTGACCT ACAATGTCGT AATCGACATT TACGGGAAGC GAGGTCGTTC TTGGGACAAA ATTCAGGATT TAATTGTCGA ACTGAGGAGC CAGGGATTCC GACCGGACAG GTACAGCTAC AATACGATGA TCAGTGCCTG CGCCCGGGAG TCCTTGTGCA AAGAAGCCAG GGGTATATTT GAGGAGATGA AAGAGGCAGG ATGTAACCCG GACAAGGTCA CCTACAATGC GCTTCTGGAT GTTTACGGGA AGGCAGGTTG GCACAAAGAA GCATCCAGGG TTTTGCAGGA AATGGAGAAA GCAGGGTGCC CACCCAATAT CGTCACATAC AACGAGCTTC TGGCCGCTTA TGGGAAATCC GGGCTCCACG CTGAAGCTTT GGCCCTGAAG CAGCAGATGG TCAGCAAGGG CATGGAGCCA GACGTCTTCA CTTACACTAG TCTTCTTTTC GGGTACAGTT CTGCCGGGCA GGACCGTCTG GCTATGGATA CTTATCTGGA AATGTGTGCA GGAGGGTGTA AGCCGAATTT GTTCACATTC AATTCTCTGA TAGACATGTT TGGGAAAAAG AAAATGTTCT CCGAGATGCT TCAAATTTTT GATGATCTTA GGGACAGTGG GTGCGCTCCG GATGTTGTTA CGTGGAACAG TATGTTAGGT GCCTATGGTA GGAATGGTAT GTACGAGGAG GTGGCTATGG TGTTCAAGAA TATGAAGAAG GCCGGGTGCA AGCCCGAGAA AGATACTTTC AACATTTTAA TCGATGCCTA TGGGAGATGT GGTTCAGCTG ATCAAGCAGT GGGAATTTAT CACGGGATGC AACGAGCAGG TTGCAGGCCA GATATCGCCA CTTTCAATGC CCTACTGGCA GCCTTCGCCA GGGAAGGACG ATGGGAATCC ACCGAAGAGC TTGTGATGGA AATGCAGAAG AAAGGCCACG AGCCCAACGA GGTATCATAC GCTTCAATGC TGCACGCTTA CGCGAATGGA GGTCAATTGG TGCGCCTCAA GAAGAAAGTC GAAGAAATCT ATGCCTTTTA CAACAACACT TTGGATACTG TCTTGTTGAA AACACTGGTT CTGGTTTACA GCAAGTGTAA CCTGTTGGAT GAGGCGGAGC TCGCATTTGC AGAGCTTCAA AGGAACGGAT ACACGCCCGA CCTCAATGCC TACAACGCAA TGATCACAGT TTACGGAAAG AGAGGACGAG TGGACAGGGC CACGGACTTG CTGGACACAC TTAAGCTAAA TGGGATTGCC CCAGATTTGG TCACCTACAA CGTTGTAATG AGTATGTACG GACGAGAAGG GATGTACAGA AAAGCAGAGG AGGTTTTGCG GGAGATGCAG CAAGCAGGAA CGAAGCCCAA CATGATTACT TACAATACGC TAATATTTGC GTATACCAAG CATGGACGCA TGGAGGATGC AGCTAGAATA TTTTTGGAAA TGGTGGATGC TGGATTGAAG CCCAACATAT TCACCTATAA TACTTTTGTT AGTAGCTATG CAAACCTTGG CATGTACACG GAAGCCATGA ATGTTCTGAA GTACATGAAA AGGAATGGTT GCAAGCCCGA GGAACTCACG TACCGAGGAC TTTTGGACGC TTACTGTAAA ATGGGCAAAG TTAGACAGGC TAATCAAATT CTTCAATGGA TCAAGGACAC TGATCCCGCT GTTGATAGAG CTGCTCTCAA GCGGATCTCC GCGCGGGTAG AAGCTTGGGG TACAAATCAC ACAAGATCTT GATCCATCAA CTTGTAAGTA ATTATGTTAA GAGAGGAGTT GCATCGCAGC TGTTCGCACT GAAGTGCTTT GTGTTTGATT CCCTCTTGTG TAAAATGTCG ATTTTCATGT GCAGAACTAC CATCCTTGTT GGGCACATGA CAGGAAATTA TTGAAGTCCA CGTTTGTGTA TGATCTTAGT TATCGCAATT TTTGTGAGGT GCAATTTATG TCGGACATTG AAGGGCTACG GTAATGAGAG TATTCAACAT ACATCAACTG TAACAGTCAT TATCTTTCCT TCTACAACCC TCGTGCTTTT CTAAGCTGCC TCTGAAACCA AGAACTAGCA GAG |
CDS |
| >Mp8g08650.1 ATGGCGAGCA ACCCCGCAGC ACCGGTGCTG TCTCCACCAC CGCTTCTACC TCCTAGACCC GGGTACTGGC GACCACCACC AGCGAATGTC GCATTTTCGG AGAGTAGTTT TGGTCGCCAT GGAAAGCTGT CGGCAATTTT GGAGCCTGTG ATCGAAGCGA GGCAGAATAG GGCCAAGGAG CAACAGCAGT TGCTGCAGCA GGGGTGGGGA GCGGTGGAAG GGCGGCCCGA GGAAGACAAG CGCCAGGGGA GTCCTACTTC TGCAGCAGCT GGGGCTCGGA ATGAGAAGGA TGCCACCCAT GCCACCCATG TCCCGACCTG GAAAAAGTAC GACAAAGATG GCAATGGTTC GACCGGTGCC AAGCAAGCGC CGGAGATTGG CTCTGGAGGA GATTGGAGAG AAGAGGCGAA GGCCGCCACC TCTTACCCAG TCGGAGGTTC TCTGCAGAGA GCGAACAAGC GCCGAATTGG GAAGCACCGC GACGAGAAGC TGCCGTGGCG AACAGGATTG TCTGCCCATG GCGTGCTTCT TTTCAACGCC ATTTCCGAAC TGGAAGGAGC TCAGAGTCCG GAACCTCTCT TGGATGCAGC TGACGACACG CTCTCGTTGC ATGACTTGCT GTGTATGATA AAGACTTTTG GAAATGATGG GAGGTGGCAG AAAGCCCTTC AGGTATTCAC TTGGATGCGA AAGCACGAGA AATTGAACCC GGACGAGCCC ACCATAGCGA GTATGTTGAG AATTCTGGGC CGGGAAATGC AGCTCACGAC TGCCATAGAG ATTTTTGAGA GCCTGAAGGG TGAGGGATAT GGGCTGAATG TATACTCCTA CACATCTCTC ATTAGTGCGT ACGCACGCAG CGGAAGATCC CAAGACGCCC TTGCACTTTT CGAGAGGATG AAGGAGGAAG GCTGCAGGCC GAACTTGGTG ACCTACAATG TCGTAATCGA CATTTACGGG AAGCGAGGTC GTTCTTGGGA CAAAATTCAG GATTTAATTG TCGAACTGAG GAGCCAGGGA TTCCGACCGG ACAGGTACAG CTACAATACG ATGATCAGTG CCTGCGCCCG GGAGTCCTTG TGCAAAGAAG CCAGGGGTAT ATTTGAGGAG ATGAAAGAGG CAGGATGTAA CCCGGACAAG GTCACCTACA ATGCGCTTCT GGATGTTTAC GGGAAGGCAG GTTGGCACAA AGAAGCATCC AGGGTTTTGC AGGAAATGGA GAAAGCAGGG TGCCCACCCA ATATCGTCAC ATACAACGAG CTTCTGGCCG CTTATGGGAA ATCCGGGCTC CACGCTGAAG CTTTGGCCCT GAAGCAGCAG ATGGTCAGCA AGGGCATGGA GCCAGACGTC TTCACTTACA CTAGTCTTCT TTTCGGGTAC AGTTCTGCCG GGCAGGACCG TCTGGCTATG GATACTTATC TGGAAATGTG TGCAGGAGGG TGTAAGCCGA ATTTGTTCAC ATTCAATTCT CTGATAGACA TGTTTGGGAA AAAGAAAATG TTCTCCGAGA TGCTTCAAAT TTTTGATGAT CTTAGGGACA GTGGGTGCGC TCCGGATGTT GTTACGTGGA ACAGTATGTT AGGTGCCTAT GGTAGGAATG GTATGTACGA GGAGGTGGCT ATGGTGTTCA AGAATATGAA GAAGGCCGGG TGCAAGCCCG AGAAAGATAC TTTCAACATT TTAATCGATG CCTATGGGAG ATGTGGTTCA GCTGATCAAG CAGTGGGAAT TTATCACGGG ATGCAACGAG CAGGTTGCAG GCCAGATATC GCCACTTTCA ATGCCCTACT GGCAGCCTTC GCCAGGGAAG GACGATGGGA ATCCACCGAA GAGCTTGTGA TGGAAATGCA GAAGAAAGGC CACGAGCCCA ACGAGGTATC ATACGCTTCA ATGCTGCACG CTTACGCGAA TGGAGGTCAA TTGGTGCGCC TCAAGAAGAA AGTCGAAGAA ATCTATGCCT TTTACAACAA CACTTTGGAT ACTGTCTTGT TGAAAACACT GGTTCTGGTT TACAGCAAGT GTAACCTGTT GGATGAGGCG GAGCTCGCAT TTGCAGAGCT TCAAAGGAAC GGATACACGC CCGACCTCAA TGCCTACAAC GCAATGATCA CAGTTTACGG AAAGAGAGGA CGAGTGGACA GGGCCACGGA CTTGCTGGAC ACACTTAAGC TAAATGGGAT TGCCCCAGAT TTGGTCACCT ACAACGTTGT AATGAGTATG TACGGACGAG AAGGGATGTA CAGAAAAGCA GAGGAGGTTT TGCGGGAGAT GCAGCAAGCA GGAACGAAGC CCAACATGAT TACTTACAAT ACGCTAATAT TTGCGTATAC CAAGCATGGA CGCATGGAGG ATGCAGCTAG AATATTTTTG GAAATGGTGG ATGCTGGATT GAAGCCCAAC ATATTCACCT ATAATACTTT TGTTAGTAGC TATGCAAACC TTGGCATGTA CACGGAAGCC ATGAATGTTC TGAAGTACAT GAAAAGGAAT GGTTGCAAGC CCGAGGAACT CACGTACCGA GGACTTTTGG ACGCTTACTG TAAAATGGGC AAAGTTAGAC AGGCTAATCA AATTCTTCAA TGGATCAAGG ACACTGATCC CGCTGTTGAT AGAGCTGCTC TCAAGCGGAT CTCCGCGCGG GTAGAAGCTT GGGGTACAAA TCACACAAGA TCTTGA |
Protein |
| >Mp8g08650.1 MASNPAAPVL SPPPLLPPRP GYWRPPPANV AFSESSFGRH GKLSAILEPV IEARQNRAKE QQQLLQQGWG AVEGRPEEDK RQGSPTSAAA GARNEKDATH ATHVPTWKKY DKDGNGSTGA KQAPEIGSGG DWREEAKAAT SYPVGGSLQR ANKRRIGKHR DEKLPWRTGL SAHGVLLFNA ISELEGAQSP EPLLDAADDT LSLHDLLCMI KTFGNDGRWQ KALQVFTWMR KHEKLNPDEP TIASMLRILG REMQLTTAIE IFESLKGEGY GLNVYSYTSL ISAYARSGRS QDALALFERM KEEGCRPNLV TYNVVIDIYG KRGRSWDKIQ DLIVELRSQG FRPDRYSYNT MISACARESL CKEARGIFEE MKEAGCNPDK VTYNALLDVY GKAGWHKEAS RVLQEMEKAG CPPNIVTYNE LLAAYGKSGL HAEALALKQQ MVSKGMEPDV FTYTSLLFGY SSAGQDRLAM DTYLEMCAGG CKPNLFTFNS LIDMFGKKKM FSEMLQIFDD LRDSGCAPDV VTWNSMLGAY GRNGMYEEVA MVFKNMKKAG CKPEKDTFNI LIDAYGRCGS ADQAVGIYHG MQRAGCRPDI ATFNALLAAF AREGRWESTE ELVMEMQKKG HEPNEVSYAS MLHAYANGGQ LVRLKKKVEE IYAFYNNTLD TVLLKTLVLV YSKCNLLDEA ELAFAELQRN GYTPDLNAYN AMITVYGKRG RVDRATDLLD TLKLNGIAPD LVTYNVVMSM YGREGMYRKA EEVLREMQQA GTKPNMITYN TLIFAYTKHG RMEDAARIFL EMVDAGLKPN IFTYNTFVSS YANLGMYTEA MNVLKYMKRN GCKPEELTYR GLLDAYCKMG KVRQANQILQ WIKDTDPAVD RAALKRISAR VEAWGTNHTR S |