Mp8g12510
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers |
| Gene3D | G3DSA:3.30.160.60 | Classic Zinc Finger |
| PANTHER | PTHR46352 | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM00355 | c2h2final6 |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. |
| KOG | KOG2462 | C2H2-type Zn-finger protein; N-term missing; [K] |
| KOG | KOG3576 | Ovo and related transcription factors; C-term missing; [K] |
| MapolyID | Mapoly0083s0069 | - |
| GO | GO:0010044 | response to aluminum ion |
| GO | GO:0010447 | response to acidic pH |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpIDDL5 | transcription factor, IDD-related | Published | |
| MpSTOP2 | transcription factor, IDD-related | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
STOP1-like transcription factor for local Pi sensing, hypothesized functionally equivalent to AtSTOP1. Down-regulated at 12 HPT and up-regulated at 24 and 150 HPT in the transcriptome, linked to organic-acid/ALMT regulation.
1 core 0 peripheral
Rico-Reséndiz, F., et al. (2020)
· International Journal of Molecular Sciences research experimental subject
STOP1-like transcription factor for local Pi sensing, hypothesized functionally equivalent to AtSTOP1. Down-regulated at 12 HPT and up-regulated at 24 and 150 HPT in the transcriptome, linked to organic-acid/ALMT regulation.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g12510 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g12510.1 TTATAACGAA CCAGAGGTTG ACAGGAGTCT GCGAACTTTG CTTCCATCGT TACTTCGTCG GCCGCTCTGG GAATGAGTGT ATGGCATCCG CAGAGAGGTA GCAGCAGCAG TCGCAGCACC ACGCTCTCAC ACACCTCACG CACACTTCCT GGAACGCGGA GCTCGGAAAG AGTCCGGGAG GGATTGGAGA AGGGATTGTG AAGTTCTGCC TGGAGGGCAG TTTGGACCGA AGGACGGAAG CAGCTGGGTT GAAGGTGTCC GAGGGAGGGG GAAGGTGGTT GTAAGAGAGC TTGATTGCAG GTGATACCTT GTAGAATCCT GCTGATCACA TTCTGCCGCG CACGCACGTC TGCCGTTTGC CGGGAACGGA GTGGACTTTC CAGTGCCTGC CAAATCATCG AATTTTTCGC TGCTGCATCC GTGCGCCTCG TTCTCTGGAT CGCTTGCCGC TCGAACGTCA TATGTCGCTG TGGTAGAGGG GAGGGGAGCA TTCTTTTCTT GTCCAGTACT CCTTCCGGAA ATTCCGAAAA CCGAAAACCA CTCGACGCCT TCCATTAGTT TTATCTTATT TTTTCCCAGG TGTGCCCGTG GCAGGCGCTT CGTAATCTGA ATGAGGCAGG CACGGGTTGT CAACAATCGC GTCTCCAGTT GACCTGGTTC ATTTGCTGCT GTGCTCGTGG CTGCGATATC TATCTGAGAG GAGTCGAGTC TATGGGTCTC GTCGACTGCT GGGTCTTTTC GGCTCTCGTT CAGTGATTCG AGACGGGGAT AGAAGGAGAG AGTGCGCGAG GGGCGAGGGG GCCACTGTGT GCGCTGGTTC TGCGTGTGTG CGATCACCAC TTGGCCTCGG ATCTTCTGAG ATCGCTCATT ATTTGCGTTG GAGGTTTTAA GTTCTCATCT GCTGAGCCCC CAGTTGTACT TGATGCTGGA AGCCAGTCAA GACATAGAGC GTTTGATGAG CGAGAGGTTA GATCCCAACC CGTTCATCGG CCGCCCTGAG GCTTTCTGGT CGTTAAAGAA ATCTCGTTCG AGGTGTACTC GTGTCGGGCC GTGCCGTCAA TTTCATGACG CTTGGCCAGC AGCAATCAAA ACTTCTCTTT CCGTCTTGAG CTTTGCGAAT CTTGCCGAGA GCAGGTATGC TCCATCTCTC CCTCGCTCGC TTCCTTCCTT CCTTCCTTCC TTCCATGTAT CTATCTGGCT CGCTCGAACT CATCACACCG GTAGGCCCAA ATCTCTCGTG GAATTTGGGT CGATTTCTCC AGCATGTAGC TGCATAGACT GATGGGCCAC TGCTTGCGGA GACTAGACCT TAAGCACCTT CGAGTCGATT TTTTCGGAGA TTGGTAGATG GATTCAAGTC GTTGCCATCC TGGTTTGGAA TGAAGTTCTT CTAAGTCGAA TGGATTGCTT CAGCCTGGGC ACTGACGTTG GGTGCCTTTT CCGGATATGA GCAGATCAGG TGGAGGTTAG CCTTCGGTCA CCTATCGCTC AAGGATAGAG TCTTGTTGAC CCCCAAGGAA ACTGCAAATG GCAGAATTTC CACACTTCCG GCAGAAGATG GAGGACACTT CGCACAATCC GTTCTCGTCT TCAGCTGCGG CCAGCATGAA CTTTTCCATG GGACGAATGC ATCCCCAGCA GGCCCATAGC CATGGTCAGC CGCCGATTAT GCGCCAGACC TTCTCGCAGG TGCACGCTAG CGCGAATGCG AGCTCTATCG GAGCCAGGAA TGCTGGAAGA CGTCCTGAAG CTGGAAACAT GCAGGATGGT ATCAATCCTC AGATGGGGCA TGGACATCCT GGAGTCCATG CTAGCCTTGG ATTGAACCAC CAGCAGCAAC AGCAGAACCA TCAGAACCAT CAGAACCATC TGAACTTGCA GCAGTTCATG GAAATCGGCC AGGTTCACAT GCTTTCGGGG GACGGGGCCT CGGGTGGGGC TGGCAAGGGT GGCCAATTCG CTATCGGGGA TCCAAATCTA CACGCCGCGT TGGCAGACAT CCAACAAAAA ATCAATAAAA TGCAAGAAAT CGTGAGAATG AACGGCGAAG GAGTGCAGAC GAATCTCCAG CAACAACAGC AAGTGGCTTC GGCCGTAAGC CTCATATCGC AGGTGACTGC TGCAATTTCT GAAGGGATGC TAAACCAGAA CCAAACGCAG AATCTATCCA TGTCTGATTC TTCGCAGCTC AGCCATCTCT TTGGGGCATG TTCTTCTTCT ACTGGCTTTA ATTTCTTTGA CCATCCGGGT TCAAGTCCAG TTAATGCTGA TATGGTTGTA GGGAACAACA ACGCGTTCTC CTCTCTCCCT GGGCGGATGG GTGGGAACAA CCACGACCAA AACACGAACA ATCTTAACGC TCTTGGTCAT GGTCAGAGCA GCATGTCCGG AACCCCTTCT GCCACCGCGG GCGACCCGAT TTTTGGCCAT GGAGCCGTGA CTACAGGCAG TGGATCTTCA GTCCACCCCA GCGAGACTGT GGGAGTGGGA AACTTGCGCC AACCGCCACC TTTCAACAAT CGCATGGCTG CCCGACCGGG AGCAGGTTCT GGCATGAATG GTTCAGGCAA GGCCTCGATC AATCGATCCT CTCCTGGCGT CATGGTTCCT TCGAACTCGG CCTCGGGGTC GCACGGTTCC GAGGATCAGG AAATGGGCGT GAGATCCAGA GGGGGAGCTT CTCGGGACGA TTTCGATGAC GGGGAGGGCG AGAATTTGGT CGATGGTTCT TACCAGCTCG TGGAACTGGA CGATCAGGAA ATTCTGGCCG AGCACACTCA CTTCTGCAAT TTGTGCGGGA AGGGATTCAA GAGAGACGCG AACCTGAGGA TGCACATGAG GAGCCACGGA GACGAGTACA AAACTCCCGA GGCTCTGGCC AGGCCCCAGA AGCCCATAGA CGAGCAGACT CCGGAAATCC CCAAGAGGTT CTCATGTCCG CACGTCGGCT GCAAGCGCAA CGTGAAGCAT CGCAAGTTTC AGCCTCTCAA ATCGCTGCTG TGCGTAAAGA ATCACTACAG GAGAAGTCAC TGTGCGAAGA ATTTGGCCTG CAGCAAGTGC AAGGTCAAGA AATTCTCCGT GGTCGCCGAT CTGAAGACCC ACGAGAAGCA CTGTGGCTGC GACAAATGGC AGTGCTCTTG CGGCACCACC TTCTCCCGCA AGGATAAGCT GTTCGGGCAC GTGAGTCTGT TCGTCGGCCA TTCGCCTGCG GCCTTGCCTC TGCCTGAAAA TCTCGCTGAG AATTCAGCCG GGTCCTTAGA AATAGTGGAC ATGGCACCAG TCGGTTCCAA TGTTGATTCC GGACTGGCAG AATCGACCTC GATGGTTCAA CAAGGACTCG ATTCCCAAGT CTCCGGAGGC TATGTGAACT GGACTCATCA GCTTTTCTGA ATAAATCTAC GGGCTGCGTA GAAGGTTCAC GCTTTTGTTG GTTTTATATA ATACTACTTA GCCCTAAGGA AGAAACTCGA GGATTCATGA TGGCCAAGGC ACATGCGCCA GTGGACCCTG TCCAGAGGCG CAGCTTTTCA CAGTGCCCTC CGGGCCTAAA GTAATTTCCC CGTCTCGGAT AGGATTAGGA TTACCTACTA CTACTTCTTC TACTGCTTCT ACTACGGCCG TGCAGTTATC GCTGAATCCT CCTCAAACTG TCCAACAGTG CTTTGCACGC TCGCACCGCT CATCATCGAT CGCAGTATCA GCAGCAGCAG TCAGTCATAT TCGATGCTTT TGCTTCGATC GATTTACTCG TTCGTGCAAG TTGTATGATG TGTAAGACTC GAGATGTAAA |
mRNA UTR + CDS |
| >Mp8g12510.1 TTATAACGAA CCAGAGGTTG ACAGGAGTCT GCGAACTTTG CTTCCATCGT TACTTCGTCG GCCGCTCTGG GAATGAGTGT ATGGCATCCG CAGAGAGGTA GCAGCAGCAG TCGCAGCACC ACGCTCTCAC ACACCTCACG CACACTTCCT GGAACGCGGA GCTCGGAAAG AGTCCGGGAG GGATTGGAGA AGGGATTGTG AAGTTCTGCC TGGAGGGCAG TTTGGACCGA AGGACGGAAG CAGCTGGGTT GAAGGTGTCC GAGGGAGGGG GAAGGTGGTT GTAAGAGAGC TTGATTGCAG GTGATACCTT GTAGAATCCT GCTGATCACA TTCTGCCGCG CACGCACGTC TGCCGTTTGC CGGGAACGGA GTGGACTTTC CAGTGCCTGC CAAATCATCG AATTTTTCGC TGCTGCATCC GTGCGCCTCG TTCTCTGGAT CGCTTGCCGC TCGAACGTCA TATGTCGCTG TGGTAGAGGG GAGGGGAGCA TTCTTTTCTT GTCCAGTACT CCTTCCGGAA ATTCCGAAAA CCGAAAACCA CTCGACGCCT TCCATTAGTT TTATCTTATT TTTTCCCAGG TGTGCCCGTG GCAGGCGCTT CGTAATCTGA ATGAGGCAGG CACGGGTTGT CAACAATCGC GTCTCCAGTT GACCTGGTTC ATTTGCTGCT GTGCTCGTGG CTGCGATATC TATCTGAGAG GAGTCGAGTC TATGGGTCTC GTCGACTGCT GGGTCTTTTC GGCTCTCGTT CAGTGATTCG AGACGGGGAT AGAAGGAGAG AGTGCGCGAG GGGCGAGGGG GCCACTGTGT GCGCTGGTTC TGCGTGTGTG CGATCACCAC TTGGCCTCGG ATCTTCTGAG ATCGCTCATT ATTTGCGTTG GAGGTTTTAA GTTCTCATCT GCTGAGCCCC CAGTTGTACT TGATGCTGGA AGCCAGTCAA GACATAGAGC GTTTGATGAG CGAGAGGTTA GATCCCAACC CGTTCATCGG CCGCCCTGAG GCTTTCTGGT CGTTAAAGAA ATCTCGTTCG AGGTGTACTC GTGTCGGGCC GTGCCGTCAA TTTCATGACG CTTGGCCAGC AGCAATCAAA ACTTCTCTTT CCGTCTTGAG CTTTGCGAAT CTTGCCGAGA GCAGATCAGG TGGAGGTTAG CCTTCGGTCA CCTATCGCTC AAGGATAGAG TCTTGTTGAC CCCCAAGGAA ACTGCAAATG GCAGAATTTC CACACTTCCG GCAGAAGATG GAGGACACTT CGCACAATCC GTTCTCGTCT TCAGCTGCGG CCAGCATGAA CTTTTCCATG GGACGAATGC ATCCCCAGCA GGCCCATAGC CATGGTCAGC CGCCGATTAT GCGCCAGACC TTCTCGCAGG TGCACGCTAG CGCGAATGCG AGCTCTATCG GAGCCAGGAA TGCTGGAAGA CGTCCTGAAG CTGGAAACAT GCAGGATGGT ATCAATCCTC AGATGGGGCA TGGACATCCT GGAGTCCATG CTAGCCTTGG ATTGAACCAC CAGCAGCAAC AGCAGAACCA TCAGAACCAT CAGAACCATC TGAACTTGCA GCAGTTCATG GAAATCGGCC AGGTTCACAT GCTTTCGGGG GACGGGGCCT CGGGTGGGGC TGGCAAGGGT GGCCAATTCG CTATCGGGGA TCCAAATCTA CACGCCGCGT TGGCAGACAT CCAACAAAAA ATCAATAAAA TGCAAGAAAT CGTGAGAATG AACGGCGAAG GAGTGCAGAC GAATCTCCAG CAACAACAGC AAGTGGCTTC GGCCGTAAGC CTCATATCGC AGGTGACTGC TGCAATTTCT GAAGGGATGC TAAACCAGAA CCAAACGCAG AATCTATCCA TGTCTGATTC TTCGCAGCTC AGCCATCTCT TTGGGGCATG TTCTTCTTCT ACTGGCTTTA ATTTCTTTGA CCATCCGGGT TCAAGTCCAG TTAATGCTGA TATGGTTGTA GGGAACAACA ACGCGTTCTC CTCTCTCCCT GGGCGGATGG GTGGGAACAA CCACGACCAA AACACGAACA ATCTTAACGC TCTTGGTCAT GGTCAGAGCA GCATGTCCGG AACCCCTTCT GCCACCGCGG GCGACCCGAT TTTTGGCCAT GGAGCCGTGA CTACAGGCAG TGGATCTTCA GTCCACCCCA GCGAGACTGT GGGAGTGGGA AACTTGCGCC AACCGCCACC TTTCAACAAT CGCATGGCTG CCCGACCGGG AGCAGGTTCT GGCATGAATG GTTCAGGCAA GGCCTCGATC AATCGATCCT CTCCTGGCGT CATGGTTCCT TCGAACTCGG CCTCGGGGTC GCACGGTTCC GAGGATCAGG AAATGGGCGT GAGATCCAGA GGGGGAGCTT CTCGGGACGA TTTCGATGAC GGGGAGGGCG AGAATTTGGT CGATGGTTCT TACCAGCTCG TGGAACTGGA CGATCAGGAA ATTCTGGCCG AGCACACTCA CTTCTGCAAT TTGTGCGGGA AGGGATTCAA GAGAGACGCG AACCTGAGGA TGCACATGAG GAGCCACGGA GACGAGTACA AAACTCCCGA GGCTCTGGCC AGGCCCCAGA AGCCCATAGA CGAGCAGACT CCGGAAATCC CCAAGAGGTT CTCATGTCCG CACGTCGGCT GCAAGCGCAA CGTGAAGCAT CGCAAGTTTC AGCCTCTCAA ATCGCTGCTG TGCGTAAAGA ATCACTACAG GAGAAGTCAC TGTGCGAAGA ATTTGGCCTG CAGCAAGTGC AAGGTCAAGA AATTCTCCGT GGTCGCCGAT CTGAAGACCC ACGAGAAGCA CTGTGGCTGC GACAAATGGC AGTGCTCTTG CGGCACCACC TTCTCCCGCA AGGATAAGCT GTTCGGGCAC GTGAGTCTGT TCGTCGGCCA TTCGCCTGCG GCCTTGCCTC TGCCTGAAAA TCTCGCTGAG AATTCAGCCG GGTCCTTAGA AATAGTGGAC ATGGCACCAG TCGGTTCCAA TGTTGATTCC GGACTGGCAG AATCGACCTC GATGGTTCAA CAAGGACTCG ATTCCCAAGT CTCCGGAGGC TATGTGAACT GGACTCATCA GCTTTTCTGA ATAAATCTAC GGGCTGCGTA GAAGGTTCAC GCTTTTGTTG GTTTTATATA ATACTACTTA GCCCTAAGGA AGAAACTCGA GGATTCATGA TGGCCAAGGC ACATGCGCCA GTGGACCCTG TCCAGAGGCG CAGCTTTTCA CAGTGCCCTC CGGGCCTAAA GTAATTTCCC CGTCTCGGAT AGGATTAGGA TTACCTACTA CTACTTCTTC TACTGCTTCT ACTACGGCCG TGCAGTTATC GCTGAATCCT CCTCAAACTG TCCAACAGTG CTTTGCACGC TCGCACCGCT CATCATCGAT CGCAGTATCA GCAGCAGCAG TCAGTCATAT TCGATGCTTT TGCTTCGATC GATTTACTCG TTCGTGCAAG TTGTATGATG TGTAAGACTC GAGATGTAAA |
CDS |
| >Mp8g12510.1 ATGGCAGAAT TTCCACACTT CCGGCAGAAG ATGGAGGACA CTTCGCACAA TCCGTTCTCG TCTTCAGCTG CGGCCAGCAT GAACTTTTCC ATGGGACGAA TGCATCCCCA GCAGGCCCAT AGCCATGGTC AGCCGCCGAT TATGCGCCAG ACCTTCTCGC AGGTGCACGC TAGCGCGAAT GCGAGCTCTA TCGGAGCCAG GAATGCTGGA AGACGTCCTG AAGCTGGAAA CATGCAGGAT GGTATCAATC CTCAGATGGG GCATGGACAT CCTGGAGTCC ATGCTAGCCT TGGATTGAAC CACCAGCAGC AACAGCAGAA CCATCAGAAC CATCAGAACC ATCTGAACTT GCAGCAGTTC ATGGAAATCG GCCAGGTTCA CATGCTTTCG GGGGACGGGG CCTCGGGTGG GGCTGGCAAG GGTGGCCAAT TCGCTATCGG GGATCCAAAT CTACACGCCG CGTTGGCAGA CATCCAACAA AAAATCAATA AAATGCAAGA AATCGTGAGA ATGAACGGCG AAGGAGTGCA GACGAATCTC CAGCAACAAC AGCAAGTGGC TTCGGCCGTA AGCCTCATAT CGCAGGTGAC TGCTGCAATT TCTGAAGGGA TGCTAAACCA GAACCAAACG CAGAATCTAT CCATGTCTGA TTCTTCGCAG CTCAGCCATC TCTTTGGGGC ATGTTCTTCT TCTACTGGCT TTAATTTCTT TGACCATCCG GGTTCAAGTC CAGTTAATGC TGATATGGTT GTAGGGAACA ACAACGCGTT CTCCTCTCTC CCTGGGCGGA TGGGTGGGAA CAACCACGAC CAAAACACGA ACAATCTTAA CGCTCTTGGT CATGGTCAGA GCAGCATGTC CGGAACCCCT TCTGCCACCG CGGGCGACCC GATTTTTGGC CATGGAGCCG TGACTACAGG CAGTGGATCT TCAGTCCACC CCAGCGAGAC TGTGGGAGTG GGAAACTTGC GCCAACCGCC ACCTTTCAAC AATCGCATGG CTGCCCGACC GGGAGCAGGT TCTGGCATGA ATGGTTCAGG CAAGGCCTCG ATCAATCGAT CCTCTCCTGG CGTCATGGTT CCTTCGAACT CGGCCTCGGG GTCGCACGGT TCCGAGGATC AGGAAATGGG CGTGAGATCC AGAGGGGGAG CTTCTCGGGA CGATTTCGAT GACGGGGAGG GCGAGAATTT GGTCGATGGT TCTTACCAGC TCGTGGAACT GGACGATCAG GAAATTCTGG CCGAGCACAC TCACTTCTGC AATTTGTGCG GGAAGGGATT CAAGAGAGAC GCGAACCTGA GGATGCACAT GAGGAGCCAC GGAGACGAGT ACAAAACTCC CGAGGCTCTG GCCAGGCCCC AGAAGCCCAT AGACGAGCAG ACTCCGGAAA TCCCCAAGAG GTTCTCATGT CCGCACGTCG GCTGCAAGCG CAACGTGAAG CATCGCAAGT TTCAGCCTCT CAAATCGCTG CTGTGCGTAA AGAATCACTA CAGGAGAAGT CACTGTGCGA AGAATTTGGC CTGCAGCAAG TGCAAGGTCA AGAAATTCTC CGTGGTCGCC GATCTGAAGA CCCACGAGAA GCACTGTGGC TGCGACAAAT GGCAGTGCTC TTGCGGCACC ACCTTCTCCC GCAAGGATAA GCTGTTCGGG CACGTGAGTC TGTTCGTCGG CCATTCGCCT GCGGCCTTGC CTCTGCCTGA AAATCTCGCT GAGAATTCAG CCGGGTCCTT AGAAATAGTG GACATGGCAC CAGTCGGTTC CAATGTTGAT TCCGGACTGG CAGAATCGAC CTCGATGGTT CAACAAGGAC TCGATTCCCA AGTCTCCGGA GGCTATGTGA ACTGGACTCA TCAGCTTTTC TGA |
Protein |
| >Mp8g12510.1 MAEFPHFRQK MEDTSHNPFS SSAAASMNFS MGRMHPQQAH SHGQPPIMRQ TFSQVHASAN ASSIGARNAG RRPEAGNMQD GINPQMGHGH PGVHASLGLN HQQQQQNHQN HQNHLNLQQF MEIGQVHMLS GDGASGGAGK GGQFAIGDPN LHAALADIQQ KINKMQEIVR MNGEGVQTNL QQQQQVASAV SLISQVTAAI SEGMLNQNQT QNLSMSDSSQ LSHLFGACSS STGFNFFDHP GSSPVNADMV VGNNNAFSSL PGRMGGNNHD QNTNNLNALG HGQSSMSGTP SATAGDPIFG HGAVTTGSGS SVHPSETVGV GNLRQPPPFN NRMAARPGAG SGMNGSGKAS INRSSPGVMV PSNSASGSHG SEDQEMGVRS RGGASRDDFD DGEGENLVDG SYQLVELDDQ EILAEHTHFC NLCGKGFKRD ANLRMHMRSH GDEYKTPEAL ARPQKPIDEQ TPEIPKRFSC PHVGCKRNVK HRKFQPLKSL LCVKNHYRRS HCAKNLACSK CKVKKFSVVA DLKTHEKHCG CDKWQCSCGT TFSRKDKLFG HVSLFVGHSP AALPLPENLA ENSAGSLEIV DMAPVGSNVD SGLAESTSMV QQGLDSQVSG GYVNWTHQLF |