Mp8g14520



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.2010.10 Metalloproteases ("zincins"), catalytic domain
FunFam G3DSA:3.30.2010.10:FF:000005 CAAX prenyl protease
Pfam PF01435 Peptidase family M48
CDD cd07343 M48A_Zmpste24p_like
PANTHER PTHR10120 CAAX PRENYL PROTEASE 1
KEGG K06013 STE24 endopeptidase [EC:3.4.24.84]
KOG KOG2719 Metalloprotease; N-term missing; [R]
GO GO:0004222 metalloendopeptidase activity
GO GO:0071586 CAAX-box protein processing
GO GO:0030176 obsolete integral component of endoplasmic reticulum membrane
GO GO:0008233 peptidase activity
GO GO:0006508 proteolysis

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Cited as a newly resolved gene in the v5.1 genome within the metalloprotease gene cluster. Mentioned only as an example of improved assembly.

0 core 1 peripheral

Montgomery, S. A., et al. (2020) · Current Biology  research sequence background
Cited as a newly resolved gene in the v5.1 genome within the metalloprotease gene cluster. Mentioned only as an example of improved assembly.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g14520.1 chr8:18578144..18582409 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g14520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g14520 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.