Mp8g15570



Description

Annotation

Database ID Description
ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1.
Gene3D G3DSA:3.10.450.60 -
Pfam PF00305 Lipoxygenase
PRINTS PR00087 Lipoxygenase signature
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
Gene3D G3DSA:4.10.375.10 -
Gene3D G3DSA:2.60.60.20 PLAT/LH2 domain
SUPERFAMILY SSF48484 Lipoxigenase
PANTHER PTHR11771 LIPOXYGENASE
ProSiteProfiles PS51393 Lipoxygenase iron-binding catalytic domain profile.
PRINTS PR00468 Plant lipoxygenase signature
Gene3D G3DSA:1.20.245.10 -
Pfam PF01477 PLAT/LH2 domain
Gene3D G3DSA:4.10.372.10 -
SMART SM00308 LH2_4
ProSiteProfiles PS50095 PLAT domain profile.
MapolyID Mapoly0079s0056 -
GO GO:0046872 metal ion binding
GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO GO:0005515 protein binding
GO GO:0034440 lipid oxidation
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpLOX13 Lipoxygenase Published

Associated Literature (AI-based literature mining, Beta-version)

Lipoxygenase; Mapoly0079s0056.1 (from nomenclature)

0 core 1 peripheral

Koeduka, T., et al. (2015) · Planta  research experimental comparator
Lipoxygenases producing fatty-acid hydroperoxides upstream of AOS (referenced).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15570.1 chr8:20125269..20131921 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.