Mp8g16420



Description

Annotation

Database ID Description
ProSitePatterns PS00893 Nudix box signature.
Pfam PF05026 Dcp2, box A domain
PANTHER PTHR23114 M7GPPPN-MRNA HYDROLASE
SMART SM01125 DCP2_2
FunFam G3DSA:1.10.10.1050:FF:000002 mRNA-decapping enzyme subunit 2
FunFam G3DSA:3.90.79.10:FF:000003 M7GpppN-mRNA hydrolase isoform 2
CDD cd03672 Dcp2p
ProSiteProfiles PS51462 Nudix hydrolase domain profile.
SUPERFAMILY SSF55811 Nudix
SUPERFAMILY SSF140586 Dcp2 domain-like
Gene3D G3DSA:1.10.10.1050 Dcp2, box A domain
Pfam PF00293 NUDIX domain
Gene3D G3DSA:3.90.79.10 Nucleoside Triphosphate Pyrophosphohydrolase
KEGG K12613 mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
KOG KOG2937 Decapping enzyme complex, predicted pyrophosphatase DCP2; C-term missing; [A]
MapolyID Mapoly0154s0022 -
GO GO:0050072 obsolete m7G(5')pppN diphosphatase activity
GO GO:0003723 RNA binding
GO GO:0016787 hydrolase activity
GO GO:0140933 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity
GO GO:0030145 manganese ion binding
GO GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA
GO GO:0005737 cytoplasm
GO GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Core P-body component (decapping enzyme) shown to be involved in the P-body turnover process.

1 core 2 peripheral

Abdrakhmanov A, Ethier E, Anisimova AS, Grujic N, Papareddy RK, Clavel M, Karagöz GE, Hallacli E, Dagdas Y. (2026) · Developmental cell  research experimental subject
Core P-body component (decapping enzyme) shown to be involved in the P-body turnover process.
Westermann, J., et al. (2020) · Frontiers in Plant Science  research experimental tool
Nucleocytoplasmic marker mirroring AtDCP2. Serves as BiFC partner co-expressed with MpDCP1 to demonstrate protein-protein interaction detection.
Koebke, E., et al. (2022) · Frontiers in Plant Science  research experimental tool
P-body marker co-expressed with MpSPI PBW, showing strong co-localization in punctate structures.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g16420.1 chr8:21176698..21181136 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g16420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g16420 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.