Mp8g16810
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. |
| CDD | cd00200 | WD40 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. |
| PANTHER | PTHR46027 | PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR |
| Gene3D | G3DSA:2.130.10.10 | - |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature |
| SUPERFAMILY | SSF50978 | WD40 repeat-like |
| Pfam | PF00400 | WD domain, G-beta repeat |
| SMART | SM00320 | WD40_4 |
| KEGG | K13341 | peroxin-7 |
| KOG | KOG0277 | Peroxisomal targeting signal type 2 receptor; [U] |
| MapolyID | Mapoly0030s0014 | - |
| GO | GO:0016558 | protein import into peroxisome matrix |
| GO | GO:0005515 | protein binding |
| GO | GO:0005782 | peroxisomal matrix |
| GO | GO:0005829 | cytosol |
| GO | GO:0005053 | peroxisome matrix targeting signal-2 binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPEX7 | PEX7, Receptor for PTS2 proteins | Published |
Associated Literature (AI-based literature mining, Beta-version)
PEX7, Receptor for PTS2 proteins; Receptor for PTS2 proteins (from nomenclature)
0 core 1 peripheral
Goto-Yamada, S., et al. (2022)
· Frontiers in Cell and Developmental Biology review citation background
M. polymorpha PEX7 (peroxin/peroxisome biogenesis)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g16810 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g16810.1 GCAGTCCTCG GCCTTCCTTT CATGGCTCGA TCGAACCAGC TCTTCGGCCT CGCTCAGTTC AGTTTGGTCG TGGCATGAAA TTCCTCGTAC CCACCGGATG ACGAGAAATT GCGCCGGGCG CTTGTTGCCG TGCTCGTGAT TGTGCCTCGC GGTCGATTTT CGTTTCGCTT TTTTGAGCTC GATCGGAGGC GGCGAAGAAA TCGAAGCGAT CGATAAGGAG GTTGAGGAGG AGCAGGAGGA GGTGATGCAA TTGTAGCGCA GGCAATCATG CCTGTGTTTA AGACTGCTTA CAATGGATAC GCGGTGCGGT TCAGTCCGTT CGTGGAGAAT CGGTTGGCCG TGGCAACCGC GCAGAATTTT GGGATAATCG GAAATGGGCG GCAGTATGTG CTGGAGTTGT CACCTAATGG GATAGTGGAG GTGGTGGCGT TCGACACGGC CGATGGGTTG TACGATTGCA CGTGGTCGGA GGACAACGAG AATATTTTAG TGTCTGCGAG CGGAGACGGG AGCATTAAGG TATGGGACAT CGCAGCTCCT CCGATGGCGA ATCCTATCCG GAGTCTGGAG GAGCACTCGC ACGAAGTGTA CTCGGTCGAC TGGAACGCCG TCCGGAAGGA TTGCTTCTTG AGCGGCTCGT GGGATGACAC AATTCGACTG TGGACGGTCG ACATGCCTCG ATCGCTGAGG GTTTTTGCCG AGCACTCGTA CTGTGTGTAC AATGCAACGT GGAATCCCAG GCACGCGGAC ATTTTTGCCT CCGCTTCCGG AGACTGCACG GTGCGAATCT GGGACATTCG GGAGCCTCGC TCCACTCTGG TCATTCCAGG CCACGAGTAC GAAATTCTTT CCTGCGACTG GAACAAATAC AACGAGACGA TGCTGGTCAC GGGCTCTGTC GACAAGTCTC TCAAGGTTTG GGATGTGCGG AATCCCCGGC AGGAAGTCAC TCGGCTGCTG GGCCACACTT ACGCCGTGCG ACGGGCCAAA TTCTCACCTC ACCGTGAGAA TCTCATAGGC TCGTGTTCTT ACGACATGAC TGTGTGCGTG TGGGATTACC GAGCTCCTGA AGATGCCCTA CTCTTCCGAT ACGATCACCA CACGGAGTTT GCAGTGGGTC TGGACATGAG CACCCTTGTG GATGGGCTTC TCGCCAGCAC CGCTTGGGAT GAGAGTGTGT TTGTCTGGCC GCAGGGCATG GACCCTAGGG CCTGAGGAAG AGCTGATCGC CGGTTGCCTG AGTCTCGTAT TTCCACATGC TGCTCGAGTT GTTCTCTGCC CCAATTCATA TTGCCTTACA CACTTCAGTC TTGAGCTTCT TCAATGTGGC CTCGGCGTTC TGTAGCTTTG CAACTTCACA AGAATTCACG CATGAATGCC TGTTACTGTC CAAAAAGTCT CGAAGGACCT CTGGACTGAG AAATAAATGT ACATAGTTAT GAAGCAAAAT ATTTCATGGC ATTCGGAATC TCGAGTGTGA GGTATGTTTT |
mRNA UTR + CDS |
| >Mp8g16810.1 GCAGTCCTCG GCCTTCCTTT CATGGCTCGA TCGAACCAGC TCTTCGGCCT CGCTCAGTTC AGTTTGGTCG TGGCATGAAA TTCCTCGTAC CCACCGGATG ACGAGAAATT GCGCCGGGCG CTTGTTGCCG TGCTCGTGAT TGTGCCTCGC GGTCGATTTT CGTTTCGCTT TTTTGAGCTC GATCGGAGGC GGCGAAGAAA TCGAAGCGAT CGATAAGGAG GTTGAGGAGG AGCAGGAGGA GGTGATGCAA TTGTAGCGCA GGCAATCATG CCTGTGTTTA AGACTGCTTA CAATGGATAC GCGGTGCGGT TCAGTCCGTT CGTGGAGAAT CGGTTGGCCG TGGCAACCGC GCAGAATTTT GGGATAATCG GAAATGGGCG GCAGTATGTG CTGGAGTTGT CACCTAATGG GATAGTGGAG GTGGTGGCGT TCGACACGGC CGATGGGTTG TACGATTGCA CGTGGTCGGA GGACAACGAG AATATTTTAG TGTCTGCGAG CGGAGACGGG AGCATTAAGG TATGGGACAT CGCAGCTCCT CCGATGGCGA ATCCTATCCG GAGTCTGGAG GAGCACTCGC ACGAAGTGTA CTCGGTCGAC TGGAACGCCG TCCGGAAGGA TTGCTTCTTG AGCGGCTCGT GGGATGACAC AATTCGACTG TGGACGGTCG ACATGCCTCG ATCGCTGAGG GTTTTTGCCG AGCACTCGTA CTGTGTGTAC AATGCAACGT GGAATCCCAG GCACGCGGAC ATTTTTGCCT CCGCTTCCGG AGACTGCACG GTGCGAATCT GGGACATTCG GGAGCCTCGC TCCACTCTGG TCATTCCAGG CCACGAGTAC GAAATTCTTT CCTGCGACTG GAACAAATAC AACGAGACGA TGCTGGTCAC GGGCTCTGTC GACAAGTCTC TCAAGGTTTG GGATGTGCGG AATCCCCGGC AGGAAGTCAC TCGGCTGCTG GGCCACACTT ACGCCGTGCG ACGGGCCAAA TTCTCACCTC ACCGTGAGAA TCTCATAGGC TCGTGTTCTT ACGACATGAC TGTGTGCGTG TGGGATTACC GAGCTCCTGA AGATGCCCTA CTCTTCCGAT ACGATCACCA CACGGAGTTT GCAGTGGGTC TGGACATGAG CACCCTTGTG GATGGGCTTC TCGCCAGCAC CGCTTGGGAT GAGAGTGTGT TTGTCTGGCC GCAGGGCATG GACCCTAGGG CCTGAGGAAG AGCTGATCGC CGGTTGCCTG AGTCTCGTAT TTCCACATGC TGCTCGAGTT GTTCTCTGCC CCAATTCATA TTGCCTTACA CACTTCAGTC TTGAGCTTCT TCAATGTGGC CTCGGCGTTC TGTAGCTTTG CAACTTCACA AGAATTCACG CATGAATGCC TGTTACTGTC CAAAAAGTCT CGAAGGACCT CTGGACTGAG AAATAAATGT ACATAGTTAT GAAGCAAAAT ATTTCATGGC ATTCGGAATC TCGAGTGTGA GGTATGTTTT |
CDS |
| >Mp8g16810.1 ATGCCTGTGT TTAAGACTGC TTACAATGGA TACGCGGTGC GGTTCAGTCC GTTCGTGGAG AATCGGTTGG CCGTGGCAAC CGCGCAGAAT TTTGGGATAA TCGGAAATGG GCGGCAGTAT GTGCTGGAGT TGTCACCTAA TGGGATAGTG GAGGTGGTGG CGTTCGACAC GGCCGATGGG TTGTACGATT GCACGTGGTC GGAGGACAAC GAGAATATTT TAGTGTCTGC GAGCGGAGAC GGGAGCATTA AGGTATGGGA CATCGCAGCT CCTCCGATGG CGAATCCTAT CCGGAGTCTG GAGGAGCACT CGCACGAAGT GTACTCGGTC GACTGGAACG CCGTCCGGAA GGATTGCTTC TTGAGCGGCT CGTGGGATGA CACAATTCGA CTGTGGACGG TCGACATGCC TCGATCGCTG AGGGTTTTTG CCGAGCACTC GTACTGTGTG TACAATGCAA CGTGGAATCC CAGGCACGCG GACATTTTTG CCTCCGCTTC CGGAGACTGC ACGGTGCGAA TCTGGGACAT TCGGGAGCCT CGCTCCACTC TGGTCATTCC AGGCCACGAG TACGAAATTC TTTCCTGCGA CTGGAACAAA TACAACGAGA CGATGCTGGT CACGGGCTCT GTCGACAAGT CTCTCAAGGT TTGGGATGTG CGGAATCCCC GGCAGGAAGT CACTCGGCTG CTGGGCCACA CTTACGCCGT GCGACGGGCC AAATTCTCAC CTCACCGTGA GAATCTCATA GGCTCGTGTT CTTACGACAT GACTGTGTGC GTGTGGGATT ACCGAGCTCC TGAAGATGCC CTACTCTTCC GATACGATCA CCACACGGAG TTTGCAGTGG GTCTGGACAT GAGCACCCTT GTGGATGGGC TTCTCGCCAG CACCGCTTGG GATGAGAGTG TGTTTGTCTG GCCGCAGGGC ATGGACCCTA GGGCCTGA |
Protein |
| >Mp8g16810.1 MPVFKTAYNG YAVRFSPFVE NRLAVATAQN FGIIGNGRQY VLELSPNGIV EVVAFDTADG LYDCTWSEDN ENILVSASGD GSIKVWDIAA PPMANPIRSL EEHSHEVYSV DWNAVRKDCF LSGSWDDTIR LWTVDMPRSL RVFAEHSYCV YNATWNPRHA DIFASASGDC TVRIWDIREP RSTLVIPGHE YEILSCDWNK YNETMLVTGS VDKSLKVWDV RNPRQEVTRL LGHTYAVRRA KFSPHRENLI GSCSYDMTVC VWDYRAPEDA LLFRYDHHTE FAVGLDMSTL VDGLLASTAW DESVFVWPQG MDPRA |