Mp8g16900



Description

Annotation

Database ID Description
PANTHER PTHR31602 GROWTH-REGULATING FACTOR 5
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF08879 WRC
ProSiteProfiles PS51667 WRC domain profile.
Pfam PF08880 QLQ
ProSiteProfiles PS51666 QLQ domain profile.
SMART SM00951 QLQ_2
MapolyID Mapoly1350s0001 -
GO GO:0005634 nucleus
GO GO:0032502 developmental process
GO GO:0005524 ATP binding
GO GO:0006351 DNA-templated transcription
GO GO:0006355 regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpGRF transcription factor, GRF Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, GRF (from nomenclature)

0 core 3 peripheral

Melissa DÁ, Luis LJ, Eduardo FS, Annie EC, Domingo MÁ, Tom FJ, Jesús LR, Fernando OM, John BL, Mario AA, Cruz-Ramírez A. (2025) · Physiologia plantarum  research citation background
Growth-regulating factor co-expressed with MpANT in apical cells.
Flores-Sandoval, E., et al. (2018b) · Frontiers in Plant Science  research experimental background
Detected in expression/co-expression analysis as highly expressed early in sporeling germination; no functional experiment performed.
Liu, W., et al. (2024a) · Cell Reports  research experimental background
GROWTH-REGULATING FACTOR transcription factor; examined in MpANT meristem study (Fig 2B,2H).

Transcript models

Transcript ID Location Sequences Extract region
Mp8g16900.1 chr8:21686006..21692517 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g16900.2 chr8:21686006..21692517 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g16900.3 chr8:21686089..21692511 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g16900 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g16900 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.