Mp8g18620
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00108 | blect_4 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd00028 | B_lectin |
| Gene3D | G3DSA:2.90.10.10 | - |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins |
| MapolyID | Mapoly1233s0001 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
A-type lectin; down DEG.
0 core 1 peripheral
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
A-type lectin; down DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g18620 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g18620.1 GCTTGCTCCG TTCATCAGAT GAGGTACCAT ACCACGCAAA TTCTAAAGTG GAGTACAGGA ATGCATGAAG AATCGATAAT CTTATCTGAA CTTAGCGCTG TTTGCAGGCG ATTGGATATC AGAAGGGAGA GGGTGACAGT CCGCATCTCA TGTCGGGTAG TAGATAAGCC GAACGCTCTG GAGTGATACT CTCCGACGTG TCCCTCAATT CTTTTATCGG AAGAATCATA GGAGTGGGGC TGGTCAGTCC AAGGTAAAAT GTCATATCCA CCCGTCAACA AATTGCCTCG CTTCTCCGAG TATATAAGAA GCTGATTCAA GCGTCTCTTG CGTGCTAAAT TCACAAACGA GCTCGCTACT TTTGACAGGC TTCCTCGACA GGATTCAGGT GAGCTCCAAA CCAGATCCAA TCACTCACTC TGAATACGAT GAGACATCGA GCTCACTTAG AGCAGTAGCT CAACAGGTGT TCCTCAGAGT TCCTCGTCAC GTAGAGTTGT AAGCATGTGA TTTCCTCGAA TCGACAATTA TTGTGATAAC CACGTGGTGA CAGTAAGGTA GAGCTGAAGA AAAGAATAAT AGATTTGTAC TTATTCATTA AGGTTGACTT CAGATCTTAT GCGGCTGCTC GGTGAATAGA ATCCGATTCT AAAGTACGTG ATTTGTCTGC AGGATCCAGG GTACTCTACA AAATGGCTCT CATGTCCGCC GCTGCGTACA TTTCGCTTCT ATGCGCCTGC TTGTTGATGC TCACCAGCTA CGTGGAAGCT TTTTCGAACG TGCTGCTGCA ACGTTCCACT ATGTTTTCTG GGCAATATCT TGCTGAGGGA CCATATCAGT TCAAAATGCA AGAGGACTGC AACCTCGTGT TGTACAAGAA CGGGCAACCA ATCTGGGCGA CCGATACCGG TGGTCTAGGC CGCGACTGCG AGTTCAGACT GAAGTCAAAT GGAAACGCAG TACTCTACAC TGGCTATGAC AAACCCTTGT TTGAGTCCAA GACTGCGGAC ATGAACAACG GGGCTCACTA CATAATAATG CAGTGTGATG GCAACGTGGT GATGTACACT GCAGAAGGGA GCCCGATTTG GGCGACCATG ACAAACGGAA AAGTCCAGGT CATCGATCTC GGGACACCTC CCACTCCAAC CGTGAACTCC ACCTCGTCGG CTGTCATCAA GTCTGTGAGA GGAGGACGTT CTCACTAATG AGGTGACAAG GAGAAATCCT TCTGGCAGTC ACCATCTGAA GAAGGAAACC TACTCTGAAT ATGGCAGATC CAAACGGTTA TGTTATTCTA GTGTTTCTGG GGTTGGATTT GCGGTTATTG ATCTAGTATA CAGATGAAGA TGGTTAGAAG TTTGCTAAAT AATCGCTCGA ATCTGGGATC ACGATATAGA CCTTCTCAGA TCTGTACACA TCTTTACTCT GGTATTATCT AAGTGTGCAT TTGAGATGTG AGATTTCCAT |
mRNA UTR + CDS |
| >Mp8g18620.1 GCTTGCTCCG TTCATCAGAT GAGGTACCAT ACCACGCAAA TTCTAAAGTG GAGTACAGGA ATGCATGAAG AATCGATAAT CTTATCTGAA CTTAGCGCTG TTTGCAGGCG ATTGGATATC AGAAGGGAGA GGGTGACAGT CCGCATCTCA TGTCGGGTAG TAGATAAGCC GAACGCTCTG GAGTGATACT CTCCGACGTG TCCCTCAATT CTTTTATCGG AAGAATCATA GGAGTGGGGC TGGTCAGTCC AAGGTAAAAT GTCATATCCA CCCGTCAACA AATTGCCTCG CTTCTCCGAG TATATAAGAA GCTGATTCAA GCGTCTCTTG CGTGCTAAAT TCACAAACGA GCTCGCTACT TTTGACAGGC TTCCTCGACA GGATTCAGGA TCCAGGGTAC TCTACAAAAT GGCTCTCATG TCCGCCGCTG CGTACATTTC GCTTCTATGC GCCTGCTTGT TGATGCTCAC CAGCTACGTG GAAGCTTTTT CGAACGTGCT GCTGCAACGT TCCACTATGT TTTCTGGGCA ATATCTTGCT GAGGGACCAT ATCAGTTCAA AATGCAAGAG GACTGCAACC TCGTGTTGTA CAAGAACGGG CAACCAATCT GGGCGACCGA TACCGGTGGT CTAGGCCGCG ACTGCGAGTT CAGACTGAAG TCAAATGGAA ACGCAGTACT CTACACTGGC TATGACAAAC CCTTGTTTGA GTCCAAGACT GCGGACATGA ACAACGGGGC TCACTACATA ATAATGCAGT GTGATGGCAA CGTGGTGATG TACACTGCAG AAGGGAGCCC GATTTGGGCG ACCATGACAA ACGGAAAAGT CCAGGTCATC GATCTCGGGA CACCTCCCAC TCCAACCGTG AACTCCACCT CGTCGGCTGT CATCAAGTCT GTGAGAGGAG GACGTTCTCA CTAATGAGGT GACAAGGAGA AATCCTTCTG GCAGTCACCA TCTGAAGAAG GAAACCTACT CTGAATATGG CAGATCCAAA CGGTTATGTT ATTCTAGTGT TTCTGGGGTT GGATTTGCGG TTATTGATCT AGTATACAGA TGAAGATGGT TAGAAGTTTG CTAAATAATC GCTCGAATCT GGGATCACGA TATAGACCTT CTCAGATCTG TACACATCTT TACTCTGGTA TTATCTAAGT GTGCATTTGA GATGTGAGAT TTCCAT |
CDS |
| >Mp8g18620.1 ATGGCTCTCA TGTCCGCCGC TGCGTACATT TCGCTTCTAT GCGCCTGCTT GTTGATGCTC ACCAGCTACG TGGAAGCTTT TTCGAACGTG CTGCTGCAAC GTTCCACTAT GTTTTCTGGG CAATATCTTG CTGAGGGACC ATATCAGTTC AAAATGCAAG AGGACTGCAA CCTCGTGTTG TACAAGAACG GGCAACCAAT CTGGGCGACC GATACCGGTG GTCTAGGCCG CGACTGCGAG TTCAGACTGA AGTCAAATGG AAACGCAGTA CTCTACACTG GCTATGACAA ACCCTTGTTT GAGTCCAAGA CTGCGGACAT GAACAACGGG GCTCACTACA TAATAATGCA GTGTGATGGC AACGTGGTGA TGTACACTGC AGAAGGGAGC CCGATTTGGG CGACCATGAC AAACGGAAAA GTCCAGGTCA TCGATCTCGG GACACCTCCC ACTCCAACCG TGAACTCCAC CTCGTCGGCT GTCATCAAGT CTGTGAGAGG AGGACGTTCT CACTAA |
Protein |
| >Mp8g18620.1 MALMSAAAYI SLLCACLLML TSYVEAFSNV LLQRSTMFSG QYLAEGPYQF KMQEDCNLVL YKNGQPIWAT DTGGLGRDCE FRLKSNGNAV LYTGYDKPLF ESKTADMNNG AHYIIMQCDG NVVMYTAEGS PIWATMTNGK VQVIDLGTPP TPTVNSTSSA VIKSVRGGRS H |