Mp8g18650
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00108 | blect_4 |
| Gene3D | G3DSA:2.90.10.10 | - |
| CDD | cd00028 | B_lectin |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| MapolyID | Mapoly0342s0001 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Lectin gene; gemma-cup expression.
0 core 1 peripheral
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
Lectin gene; gemma-cup expression.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g18650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g18650.1 AATTCTTTTA TCGGAAGAAT CATAGGAGTG GGGCTGGTCA GTCCAAGGTA AAATGTCATA TCCACCCGTC AATAGATTGC CTCGCTTCTC CGAGTATATA AGAAGCTGAT TCAAGCGTCT CTTGCGTGCT AAATTCACAA ACGAGCTCGC TACTTTTGAC AGGCTTCCTC GACAGGATTC AGGTGAGCTC CAAACCAGAT CCAATCACTC ACTCTGAATA CGATGAGACA TCGAGCTCCC TTAGAGCAGT AGCTCAACAG GTGTTCCTCA GAGTTCCTCT TCACGTAGAG TTGTAAGCAT GTGATTTCCT CGAATCGACA ATTATTGTGA TAACCACGTG GTGACAGTAA GGTAGAGCTG AAGAAAACAA TAGTAGATTT GTACTTATTC ATTAAGGTTG ACTTCAGATC TTATGCGGCT GCTCGGTGAA GAGAATCCGA TTCTAAAGTA CGTGATTTGT CTGCAGGAAC CAGGGTACTC TACAAAATGG CTCTCATGTC CGCCGCTGCG TACATTTCGC TTCTATGCGC CTGCTCGTTG ATGCTCACTA GCTACGTGGA AGCTTTTAAT AGCGTGCTGC TGCAAGGTTC CACTATGTTT CCTGGGCAAT ATCTTTTTCA AGGACCTTAT CAGTTCAAAA TGCAAGAGGA CTGCAACCTC GTGTTGTACA AGAACGGGCA ACCACTCTGG GCGAGCAATA CCGGTGGTCT AGGCCGCGAC TGCGAGTTCA GACTGAAGAA AAATGGAAAC GCAGTACTCT ACACTGGCTA TGACAACGCC TTGTTTGAGT CCAAGACTGC GGACATGAAC AACGGGGCTC ACTACATAAT AATGCAGTGT GATGGCAACG TGGTGATGTA CACTGCAGAA GGGAGCCCGA TTTGGGCGAC CATGACAAAC GGAAAAGTCC AGGTCATCGA TCTCGGCACA CCTCCCACTC CCACCGTGAA CTCCACCTCG TCGGCTGTCA TCAAGTCTGT GAGAGGAGGA CGTTCTCAGT AATGAGGTGA CAAGGAGAAA TCCTTCTGGT AGTCACCATC TGAAGAAGGA AACCTACTCT GAATATGGCA GATCGAAACG ATTATGGTAT TCTAGTATTT CTCGCGTTTG ATTTGCGGTT ATAGATCTAG TATACAGATG AAGATGGTTA GAAGTTTGCT CAATAATCCT ACGAATCTGG GATGACGTGT AGACCTTCTC AGATCTGTAC ACATCTTCAC TCTGGTATAA TCTAAGTGTG CATTTGAGAT GTGAGAATTC CA |
mRNA UTR + CDS |
| >Mp8g18650.1 AATTCTTTTA TCGGAAGAAT CATAGGAGTG GGGCTGGTCA GTCCAAGGTA AAATGTCATA TCCACCCGTC AATAGATTGC CTCGCTTCTC CGAGTATATA AGAAGCTGAT TCAAGCGTCT CTTGCGTGCT AAATTCACAA ACGAGCTCGC TACTTTTGAC AGGCTTCCTC GACAGGATTC AGGAACCAGG GTACTCTACA AAATGGCTCT CATGTCCGCC GCTGCGTACA TTTCGCTTCT ATGCGCCTGC TCGTTGATGC TCACTAGCTA CGTGGAAGCT TTTAATAGCG TGCTGCTGCA AGGTTCCACT ATGTTTCCTG GGCAATATCT TTTTCAAGGA CCTTATCAGT TCAAAATGCA AGAGGACTGC AACCTCGTGT TGTACAAGAA CGGGCAACCA CTCTGGGCGA GCAATACCGG TGGTCTAGGC CGCGACTGCG AGTTCAGACT GAAGAAAAAT GGAAACGCAG TACTCTACAC TGGCTATGAC AACGCCTTGT TTGAGTCCAA GACTGCGGAC ATGAACAACG GGGCTCACTA CATAATAATG CAGTGTGATG GCAACGTGGT GATGTACACT GCAGAAGGGA GCCCGATTTG GGCGACCATG ACAAACGGAA AAGTCCAGGT CATCGATCTC GGCACACCTC CCACTCCCAC CGTGAACTCC ACCTCGTCGG CTGTCATCAA GTCTGTGAGA GGAGGACGTT CTCAGTAATG AGGTGACAAG GAGAAATCCT TCTGGTAGTC ACCATCTGAA GAAGGAAACC TACTCTGAAT ATGGCAGATC GAAACGATTA TGGTATTCTA GTATTTCTCG CGTTTGATTT GCGGTTATAG ATCTAGTATA CAGATGAAGA TGGTTAGAAG TTTGCTCAAT AATCCTACGA ATCTGGGATG ACGTGTAGAC CTTCTCAGAT CTGTACACAT CTTCACTCTG GTATAATCTA AGTGTGCATT TGAGATGTGA GAATTCCA |
CDS |
| >Mp8g18650.1 ATGGCTCTCA TGTCCGCCGC TGCGTACATT TCGCTTCTAT GCGCCTGCTC GTTGATGCTC ACTAGCTACG TGGAAGCTTT TAATAGCGTG CTGCTGCAAG GTTCCACTAT GTTTCCTGGG CAATATCTTT TTCAAGGACC TTATCAGTTC AAAATGCAAG AGGACTGCAA CCTCGTGTTG TACAAGAACG GGCAACCACT CTGGGCGAGC AATACCGGTG GTCTAGGCCG CGACTGCGAG TTCAGACTGA AGAAAAATGG AAACGCAGTA CTCTACACTG GCTATGACAA CGCCTTGTTT GAGTCCAAGA CTGCGGACAT GAACAACGGG GCTCACTACA TAATAATGCA GTGTGATGGC AACGTGGTGA TGTACACTGC AGAAGGGAGC CCGATTTGGG CGACCATGAC AAACGGAAAA GTCCAGGTCA TCGATCTCGG CACACCTCCC ACTCCCACCG TGAACTCCAC CTCGTCGGCT GTCATCAAGT CTGTGAGAGG AGGACGTTCT CAGTAA |
Protein |
| >Mp8g18650.1 MALMSAAAYI SLLCACSLML TSYVEAFNSV LLQGSTMFPG QYLFQGPYQF KMQEDCNLVL YKNGQPLWAS NTGGLGRDCE FRLKKNGNAV LYTGYDNALF ESKTADMNNG AHYIIMQCDG NVVMYTAEGS PIWATMTNGK VQVIDLGTPP TPTVNSTSSA VIKSVRGGRS Q |