MpVg00760



Description

Annotation

Database ID Description
SMART SM00176 ran_sub_2
ProSiteProfiles PS51420 small GTPase Rho family profile.
FunFam G3DSA:3.40.50.300:FF:000067 ras-related protein RABA1f
CDD cd01868 Rab11_like
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PRINTS PR00449 Transforming protein P21 ras signature
Pfam PF00071 Ras family
SMART SM00173 ras_sub_4
NCBIfam TIGR00231 small GTP-binding protein domain
ProSiteProfiles PS51419 small GTPase Rab1 family profile.
Gene3D G3DSA:3.40.50.300 -
SMART SM00175 rab_sub_5
ProSiteProfiles PS51421 small GTPase Ras family profile.
PANTHER PTHR47979 DRAB11-RELATED
SMART SM00174 rho_sub_3
KEGG K07904 Ras-related protein Rab-11A
KOG KOG0087 GTPase Rab11/YPT3, small G protein superfamily; [U]
MapolyID MapolyY_A0041 -
GO GO:0003924 GTPase activity
GO GO:0016192 vesicle-mediated transport
GO GO:0005525 GTP binding
GO GO:0005768 endosome

Nomenclature

Gene symbol Product Transcript ID Status
MpRAB11AY RAB GTPase Published

Associated Literature (AI-based literature mining, Beta-version)

Endosomal Rab GTPase; overexpressed mCitrine-MpRab11A accumulated at pathogen interfaces and intracellular hyphae during infection, relocalizing from endosomes, indicating trafficking recruitment to infection structures.

1 core 1 peripheral

Carella, P., et al. (2018) · Proceedings of the National Academy of Sciences USA: doi/10.1073/pnas.1717900115  research experimental subject
Endosomal Rab GTPase; overexpressed mCitrine-MpRab11A accumulated at pathogen interfaces and intracellular hyphae during infection, relocalizing from endosomes, indicating trafficking recruitment to infection structures.
Minamino, N., et al. (2018) · Plant and Cell Physiology  research sequence comparator
RAB11; family inventory.

Transcript models

Transcript ID Location Sequences Extract region
MpVg00760.1 chrV:5050918..5054681 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of MpVg00760 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of MpVg00760 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.