Mp1g01040



Description

Annotation

Database ID Description
CDD cd13686 GluR_Plant
CDD cd19990 PBP1_GABAb_receptor_plant
FunFam G3DSA:1.10.287.70:FF:000037 Glutamate receptor
FunFam G3DSA:3.40.190.10:FF:000039 Glutamate receptor
FunFam G3DSA:3.40.190.10:FF:000054 Glutamate receptor
FunFam G3DSA:3.40.190.10:FF:000109 Glutamate receptor
FunFam G3DSA:3.40.50.2300:FF:000081 Glutamate receptor
Gene3D G3DSA:1.10.287.70 -
Gene3D G3DSA:3.40.190.10 -
Gene3D G3DSA:3.40.50.2300 -
KEGG K05387 glutamate receptor, ionotropic, plant
KOG KOG1052 Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits; [PET]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR18966 IONOTROPIC GLUTAMATE RECEPTOR
PIRSF PIRSF037090 IGluLR_plant
PRINTS PR01176 Metabotropic gamma-aminobutyric acid type B receptor signature
Pfam PF00060 Ligand-gated ion channel
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3
Pfam PF01094 Receptor family ligand binding region
Pfam PF10613 Ligated ion channel L-glutamate- and glycine-binding site
SMART SM00079 GluR_14
SUPERFAMILY SSF53822 Periplasmic binding protein-like I
SUPERFAMILY SSF53850 Periplasmic binding protein-like II
GO GO:0038023 signaling receptor activity
GO GO:0005886 plasma membrane
GO GO:0016020 membrane
GO GO:0015276 ligand-gated monoatomic ion channel activity
MapolyID Mapoly0029s0142 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGLR calcium channel GLR Published

Associated Literature (AI-based literature mining)

GLUTAMATE RECEPTOR-LIKE channel; required for rapid long-distance propagation of wound-induced Ca2+ waves and electrical (surface-potential) signals. Mpglr knockout abolishes rapid systemic propagation.

2 core 0 peripheral

Beraldo, C., et al. (2024) · New Phytologist  other experimental subject
Glutamate receptor-like (GLR) channel; a fundamental component of the wounding/defence signalling pathway in the nonvascular plant M. polymorpha, studied via mutant lines and surface electrodes.
Watanabe, K., et al. (2024) · Plant & Cell Physiology  research experimental subject
GLUTAMATE RECEPTOR-LIKE channel; required for rapid long-distance propagation of wound-induced Ca2+ waves and electrical (surface-potential) signals. Mpglr knockout abolishes rapid systemic propagation.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g01040.1 chr1:1055646..1060897 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g01040.2 chr1:1055646..1060897 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g01040 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g01040 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.