Mp1g03970



Description

Annotation

Database ID Description
CDD cd07709 flavodiiron_proteins_MBL-fold
Gene3D G3DSA:2.30.110.10 -
Gene3D G3DSA:3.40.50.360 -
Gene3D G3DSA:3.60.15.10 -
KOG KOG3135 1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein; C-term missing; [R]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR32145 DIFLAVIN FLAVOPROTEIN A 2-RELATED
Pfam PF00258 Flavodoxin
Pfam PF01613 Flavin reductase like domain
Pfam PF19583 ODP family beta lactamase
ProSitePatterns PS00201 Flavodoxin signature.
ProSiteProfiles PS50902 Flavodoxin-like domain profile.
SMART SM00849 Lactamase_B_5a
SMART SM00903 Flavin_Reduct_2
SUPERFAMILY SSF50475 FMN-binding split barrel
SUPERFAMILY SSF52218 Flavoproteins
SUPERFAMILY SSF56281 Metallo-hydrolase/oxidoreductase
GO GO:0010181 FMN binding
GO GO:0009055 electron transfer activity
MapolyID Mapoly0005s0210 -

Nomenclature

Gene symbol Product Transcript ID Status
MpFLV1 flavodiiron proteins Provisional

Associated Literature (AI-based literature mining)

Flavodiiron protein FLV1 (Mapoly0005s0210); drives alternative (pseudocyclic) electron flow protecting photosystem I from photooxidative damage during fluctuating light. Mpflv1 mutant shows PSI damage.

1 core 0 peripheral

Shimakawa, G., et al. (2017) · Plant Physiology  research experimental subject
Flavodiiron protein FLV1 (Mapoly0005s0210); drives alternative (pseudocyclic) electron flow protecting photosystem I from photooxidative damage during fluctuating light. Mpflv1 mutant shows PSI damage.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03970.1 chr1:4278375..4288763 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g03970 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g03970 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.