| Database | ID | Description |
|---|---|---|
| CDD | cd10507 | Zn-ribbon_RPA12 |
| FunFam | G3DSA:2.20.25.10:FF:000049 | DNA-directed RNA polymerase subunit |
| Gene3D | G3DSA:2.20.25.10 | - |
| KEGG | K03000 | DNA-directed RNA polymerase I subunit RPA12 |
| KOG | KOG2907 | RNA polymerase I transcription factor TFIIS, subunit A12.2/RPA12; [K] |
| PANTHER | PTHR11239 | DNA-DIRECTED RNA POLYMERASE |
| PIRSF | PIRSF005586 | RNApol_RpoM |
| Pfam | PF01096 | Transcription factor S-II (TFIIS) |
| ProSitePatterns | PS00466 | Zinc finger TFIIS-type signature. |
| ProSiteProfiles | PS51133 | Zinc finger TFIIS-type profile. |
| SMART | SM00440 | Cys4_2 |
| SUPERFAMILY | SSF57783 | Zinc beta-ribbon |
| GO | GO:0001054 | RNA polymerase I activity |
| GO | GO:0003676 | nucleic acid binding |
| GO | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| GO | GO:0005736 | RNA polymerase I complex |
| GO | GO:0006351 | DNA-templated transcription |
| GO | GO:0006363 | termination of RNA polymerase I transcription |
| GO | GO:0008270 | zinc ion binding |
| MapolyID | Mapoly0043s0107 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSGF1 | DNA-directed RNA polymerase I subunit RPA12 | Published | |
| MpRPA12 | DNA-directed RNA polymerase I subunit RPA12 | Provisional |
Locus ID for MpSGF1, listed in the candidate peptide gene table.
0 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g07140.1 GAGGAAGGGA AGGGAAGGAA GGAAGGATTT AGCGAGAGGC ACAGGGAGCA TGGAGGAGAG ACAATGTGTC GAGGAATGAT CGATACTCAG AACCAGTGAT CTAAATATGC TTTGAGAGCA GATAATGGCG TTCCGAGATC ACGACAGTTT GTTTTGCACT CTGTGCGGCA CAGGACTGTC TTTTGGGTCG GCCAGTTATG CGACCTGTCC ACTCTGCAAT TCCCACCGCT CTGTTTCAGG TCCGCCTCTG GGCTTTGCTT GCCATGTTTG ATGTGCTCTG GTGCTTTGGT GTTGTCGTGA TGCGTAGCAG CAGCGACAGG TGAAATTCTG GAAATTGCTG TTGTGTTCTT TCGCTGGGTC ATGGTCTGTC GGCATTGCGT GGTCTTGCGA GTGAGTGCTC GCTCACTCGC CGTTGACTGG TAAATTGTGT CCGGTGGTTG GTTGCACTCC TCTTCTATTT ATGCTCCGAA TGCTGTCAAC CTCCCGAGCA AGATTACAAC TGACTTGAAG AAATGCCGCG TGTTCGTGTG TGCGTCGAAG TTCTCAGTTT CCTCCGAAAC GATTTTTCTA CATTGTCACT GACGATAGAA AATTTATTTC CTTGTTCACT CAAAGTCGCG CATGGTGCGT GGTTGATAAG TTTCATTCTT CGCGCGTTTT GAACTAGTCT ACAGGAGACC CCGTACAGCT TTAGGTTTTC CTCATTGAAT TCTGCGTCGC TCAAGTCTCA AAATCTACGA TCGAGGCAGT AGCTCGTTCA TAGACTCGCT CTCGAATAAG CCGAGGGCTC GAATTGTCTG TTCTTCATGC TTTGAACGCT AGTTACTTTC TCAAATGTGC AATGTTCTCA GCATCCCTTT CAAGGCTGGG TTAAGGTGAT GATGCGTTAA GCCTCCGGAG TGTCTGCAGG TCTTTTGCTC TAGTTGTTTT TAGGCTCAAG CATTTGCCGT CCCTAGCGGA ACCTGCTGTT GTTGCCCTGA GCGTTGGTTA TTCGGATGCG CAGATTTCGA AGGCAAAGAG ATTTGGTGTT CTAGCACTGC CGAGGTCAGA TATTCAGAGG CCCGGCATTT CTTGATCCCG CATTATGATT GTATAATCAT GAAATGCAAG CATTTCATTA GTTACCTGTT TGTGTCTTAC TTGGGTGTGG TGCTAGTCTA TGTGTCATGT TCCACGCTGG TCGATGTTTG CGCTGGTAGG GATTTTTTCT CAGCTGTCCA CTTCGTACGT ACTCGGTTTA CAGGACTTGA TCAGGCGGCT GGGAATCGAG CCTTTAATCC TGCCAGATAG TGATGCCCAA GGTGGTCTTG AGAATGAGGA AATTCAGCAG AGGGCCGTTG TAAGTTCTCC GTGGTCGTGT TCTCAGGGTG GCAACATTTC TACATATTCA ATTCGCATCT TAGTTTTCTC TGCTTCTCTC GCAGTTTGTG TCCGATGGCT CACGTGGACT ATGCCGTCGT GTGCATGTGG TATACTCGCC TTCCCTCTTT CTGGTTTGAA CGAATTTTTG GTGACTATCT GCAGGTGAAC GATGAATGCC CGAAGTGCCG CAATCCTCAG CTGGAGTATT ATACCAGACA GGTGATGTGA ATCACAGTTC ACTCTGAAGT GCTTTTGGTG TGAGCAAGTT TTGACAGAGC TGATCAAGAG CTGCATTGTG TGCGAAAGAG ACACCGCGTA GATACTTTTC TCGACATTTC CTAGGGCCAC GATGGAGTCG GGTAGAAGAA TAAATGTCGT GTTGTAACTG ACATTTCTTA TCATCGGTGT TGCAGTTACG GTCGGCCGAT GAAGGGCAAA CAGTGTTCTA CGAATGTGCC AAATGCCAGT ACAAATTTTC GCAGAACATG TAACTGATTT TCAAGGTTAA AATTCTGCTC ATACACCCAA TGACTGCACC GCCCAACGAC GTGTAGGTCT TAAGTGGCCG TGATATGGAA GCAAATGAGC GTCTAGGGTT TGTTAGTTAC ATCAGGAAAG AACAAGTCGC ATTTCTCTCT CTAGAGTGTC CCGCACAGAC ATCTTGAGAT CGCTGCGCAA GCCGTCTGTA ATTATGCGGG GCTACATTGT ACGTGCATAG AAGGGTAATT GTCGATTGTC ATTACTTCAT GTTGTTATGA TTGTGAGGCC GTGAGGTCCC GTTTACTTGG ATTGCTACAT GACGAAGGGG CAAGATTTTC CAAGGGTTTT GCAATGTTGG GAATGTTGGC AAGTAGTGTC ATTGTTGTTC AGTTGAGATG ATGGTGTTTT TGTATATTCA ATGCTTGACA GCGAGGACGC ATTGCGATAT ACAGAATGAT TGTTGAAAAG TTAGACTGGC TGCGTCATGC TGGACTTCAA ATATTTTCCT TGGACATACA ACCGGATGGA TCGCGATTTG CCACCGCTGG AGGGGATCAT AAGGTGCGGA TATGGAGCAT GACGGCTCTG CAGAGTAGCG ATCAAGGACC TTCGCAGCCC AGATTACTTG CGACTTTGCG CGACCATTTT GGATCAGTGA ACTGCGTACG ATGGGCCAAG GGTGGTCACT TCATCGCATC TGGGTCAGAC GATAATCTGA TTCTCGTACA CAAACGACAT CCTGGTTCCG GCACGACAGA GTTTGGAAGC GGAGAGCCTC CAGATGCCGA GAATTGGAAA ACACTCTTGA CTCTTCGTGG ACATTCAGCG GACGTGGTTG ATTTGGGATG GTCTCCGGAT GACTCTATGA TAGCAAGCTG CAGCTTGGAC AACAGTGTGC GAATCTGGTC GGCCTTAAAT GGGAACCTGA TTTCTGTTCT CATGGGTCAC ACGAGTCTCG TGAAAGGTGT AGCTTGGGAT CCTGTTGGCT CCTTCCTCGC CACCCAGTCC GACGACAAGA CCGTGATCAT ATGGCACACG GGCAATTGGA GCATGATTCA CAGGGCTGAA GGGCCCTGGG AGAAGACGGT GGGTTTCACC TTCTCCAGGC GATTGGCATG GTCACCTTGC GGACACTTCA TCACCACCAC TCACGGATTC CAGGAGCCCA GCCACACAGC ACCTGTGTTA GAAAGAGGAG AATGGTGCAC TTCGTTCGAC TTCGTCGGGC ACAACGCTCC GGTGGTCGCA GTGCGCTACA ATCATTCCAT GTTTCGGAAA GCGCCGGAGT CCAAGAAGAA TGGTGGCACC CACGACGCCG CCGGTGCAGA TTCTGCCCCG TACAACGTCA TAGCTATGGG CAGTCAGGAC TGCAACATCA CCGTGTGGAC CACGGCCAGT CCACGCCCCG TTTTTGTAGG AAAACATTTT TTCACGCAGA GCGTTGTCGA TCTCTCGTGG AGCACTGACG GCTACACATT GCTGTGCTGC TCGCTCGATG GCACCGTTGC GTCATTTAGT TTCGAGGCCA AAGAGCTTGG CCTGAAAGTC ACTGATGCCG AGATGCAAGA GTTTAAGAAG ACCCGCTACG GTGATCAGAA CGTCCGCGGA TTGACTCTCG TAGAAAGTGC ATCGCAACTC ATTTTAGAAG CTGCTGCTGC CAAGCAGCTC GCTACGTCGG TTGGGACGGT GGAGGTGCAG AGCTCCGCAG CTGAGAAGGC TCCTGAGGTT GCACCGCAGG AATCCGCTGC AACGAACAGG AAAACTCGAG TGTTGCAGCA AACAGAGTAT CGCGGTGCTG ACGGGCGCCG AAGAATCATC CCTAAGCCCC TGGAGCAGGA CTGTAAAGAG AATGAAGCTC CCGATGGGGC GAAAGGCATT GGATATGAAG TGTTCAACCC TCCTCAGTCC TCGAAAAACG TCCCGAACGC TGGTCCAAGA TCTGAAGGCA GGGAGAGACT CTTTACTTTC GAAGGCGATG GAACTGGCAG GCAAGGCACT GACACTAGGC CCAAGACGGC TGATGTTTCC ATGACTGATC GGTTGGTTGC AGGACCGGGT GGGGAACCTC CGAAACAAGC GAGCCGCACA CCCACGTCCA AATTGTTAAT ACAACCGGCT AGCAGTCCAG GTGTTCTTAC CTTCGAGATC CATCCTTCAT TAGAAGCACC GATTTGTTTG GAGGCCCGTC CTGCTGGAAC CCAGCAGAAA GGAGGAACAG CAGAAGCAAA TGGAGTAGTG GACAGCAGTT TGGAGACGGA TATTGTCTGC TCACAGGGAG GGAAAATACT GTGGTGGGAT CGAGTCAAGA GGAAGGCCAC CATCTTGACA GGGAATTCGA ATTTTTGGGC TGTTGCTGGT GATGACAACA GCGTGCAGAT ATACACGGTT GCCGGCAGAC AAGCCTTGCC ACTCTTGATT TTGAGCTCAC CGGCAGCGTT CATGGATTGC GACAAGAACT GGAGCTTACT TCTGCTTACT GGGTGTGGAT CTCTGCACAT GTGGGATATA CGCAACTCCA CTAGCATCCT CCTAGAATCG GTCTATGCTC TGTTGTCGTG TTACCCGAGT TCACCCTCAG AGGCTGGTCA AGTGAGAGTG GTATCAGCGA GAATCTCCGA AGTTGGTGCA CCCTTGGTTG TGCTGGAAAA TCACCATGCT TTTTTGTTTC ACATGGACCT GAAGTGTTGG CTAAGGATAG CTGACAGCTT CCCGTCATCA ACCTTCTGTG AATTCAGTCC CATCTTAACA TCCATGAGAG CAAAAGCTGG TCCAACTCAA AAGAAAGCTG GATCACTTTG CGTGGATGGC ACGTCCTTCA ACTTGCTGAA AGCTTCTGCT CACGAATCAG GCAGTTACAA TAATCGGTCA CAGTTGGAGG CTCAAATGGG AGCAGCTTTA GCCCTCCGTT CTGCTGAGGA ATATCGTCGC TGTCTTTTGG CCTATGCTCG ATGCTTGGCA AGAGATGCAG ACAAGTCGAG ATTGAGAGAG CTCTGTGAAG AGTTGCTAGG ACCCCGGCAG TCACCCGGTA TTGACGAGAG TAGAGATCCT GCAGTTTCAT CTCAGTGGGA CCCTTCTATT CTTGGAATGA AGAAACGGGA TCTGCTTAAA CAGGACGTGT TACCTGCTAT GGCATCCAAT CGAGCCATCC AGAGACTTCT TAGTGAATTT GTAGATCTAC TCACAGAAAT TGAATCCAGA GTACAGCAGG GTCAACCCGA AGGTTCATCT CCCTGACTCA TCAAAATAGC CATCATCAGG ATTAGGTCTT TGACGGAACA AGAAGCTATA TCGAGATTTT TGAGGGTTAT CGGACTCAGT ATGCGGGTTC TTTTGGGATC ATTTGTAAGC CCAACCCCTG TCCCTGTAGA TAGCAGCCCT CTCGGTATGT CAAGCTATTT TTTGTTTTCT CGATCTAAAG GAAATTGTGC TCCTTAGCTT TATCCCA |
mRNA UTR + CDS |
| >Mp1g07140.1 GAGGAAGGGA AGGGAAGGAA GGAAGGATTT AGCGAGAGGC ACAGGGAGCA TGGAGGAGAG ACAATGTGTC GAGGAATGAT CGATACTCAG AACCAGTGAT CTAAATATGC TTTGAGAGCA GATAATGGCG TTCCGAGATC ACGACAGTTT GTTTTGCACT CTGTGCGGCA CAGGACTGTC TTTTGGGTCG GCCAGTTATG CGACCTGTCC ACTCTGCAAT TCCCACCGCT CTGTTTCAGA TTTCGAAGGC AAAGAGATTT GGTGTTCTAG CACTGCCGAG GACTTGATCA GGCGGCTGGG AATCGAGCCT TTAATCCTGC CAGATAGTGA TGCCCAAGGT GGTCTTGAGA ATGAGGAAAT TCAGCAGAGG GCCGTTGTGA ACGATGAATG CCCGAAGTGC CGCAATCCTC AGCTGGAGTA TTATACCAGA CAGTTACGGT CGGCCGATGA AGGGCAAACA GTGTTCTACG AATGTGCCAA ATGCCAGTAC AAATTTTCGC AGAACATGTA ACTGATTTTC AAGCGAGGAC GCATTGCGAT ATACAGAATG ATTGTTGAAA AGTTAGACTG GCTGCGTCAT GCTGGACTTC AAATATTTTC CTTGGACATA CAACCGGATG GATCGCGATT TGCCACCGCT GGAGGGGATC ATAAGGTGCG GATATGGAGC ATGACGGCTC TGCAGAGTAG CGATCAAGGA CCTTCGCAGC CCAGATTACT TGCGACTTTG CGCGACCATT TTGGATCAGT GAACTGCGTA CGATGGGCCA AGGGTGGTCA CTTCATCGCA TCTGGGTCAG ACGATAATCT GATTCTCGTA CACAAACGAC ATCCTGGTTC CGGCACGACA GAGTTTGGAA GCGGAGAGCC TCCAGATGCC GAGAATTGGA AAACACTCTT GACTCTTCGT GGACATTCAG CGGACGTGGT TGATTTGGGA TGGTCTCCGG ATGACTCTAT GATAGCAAGC TGCAGCTTGG ACAACAGTGT GCGAATCTGG TCGGCCTTAA ATGGGAACCT GATTTCTGTT CTCATGGGTC ACACGAGTCT CGTGAAAGGT GTAGCTTGGG ATCCTGTTGG CTCCTTCCTC GCCACCCAGT CCGACGACAA GACCGTGATC ATATGGCACA CGGGCAATTG GAGCATGATT CACAGGGCTG AAGGGCCCTG GGAGAAGACG GTGGGTTTCA CCTTCTCCAG GCGATTGGCA TGGTCACCTT GCGGACACTT CATCACCACC ACTCACGGAT TCCAGGAGCC CAGCCACACA GCACCTGTGT TAGAAAGAGG AGAATGGTGC ACTTCGTTCG ACTTCGTCGG GCACAACGCT CCGGTGGTCG CAGTGCGCTA CAATCATTCC ATGTTTCGGA AAGCGCCGGA GTCCAAGAAG AATGGTGGCA CCCACGACGC CGCCGGTGCA GATTCTGCCC CGTACAACGT CATAGCTATG GGCAGTCAGG ACTGCAACAT CACCGTGTGG ACCACGGCCA GTCCACGCCC CGTTTTTGTA GGAAAACATT TTTTCACGCA GAGCGTTGTC GATCTCTCGT GGAGCACTGA CGGCTACACA TTGCTGTGCT GCTCGCTCGA TGGCACCGTT GCGTCATTTA GTTTCGAGGC CAAAGAGCTT GGCCTGAAAG TCACTGATGC CGAGATGCAA GAGTTTAAGA AGACCCGCTA CGGTGATCAG AACGTCCGCG GATTGACTCT CGTAGAAAGT GCATCGCAAC TCATTTTAGA AGCTGCTGCT GCCAAGCAGC TCGCTACGTC GGTTGGGACG GTGGAGGTGC AGAGCTCCGC AGCTGAGAAG GCTCCTGAGG TTGCACCGCA GGAATCCGCT GCAACGAACA GGAAAACTCG AGTGTTGCAG CAAACAGAGT ATCGCGGTGC TGACGGGCGC CGAAGAATCA TCCCTAAGCC CCTGGAGCAG GACTGTAAAG AGAATGAAGC TCCCGATGGG GCGAAAGGCA TTGGATATGA AGTGTTCAAC CCTCCTCAGT CCTCGAAAAA CGTCCCGAAC GCTGGTCCAA GATCTGAAGG CAGGGAGAGA CTCTTTACTT TCGAAGGCGA TGGAACTGGC AGGCAAGGCA CTGACACTAG GCCCAAGACG GCTGATGTTT CCATGACTGA TCGGTTGGTT GCAGGACCGG GTGGGGAACC TCCGAAACAA GCGAGCCGCA CACCCACGTC CAAATTGTTA ATACAACCGG CTAGCAGTCC AGGTGTTCTT ACCTTCGAGA TCCATCCTTC ATTAGAAGCA CCGATTTGTT TGGAGGCCCG TCCTGCTGGA ACCCAGCAGA AAGGAGGAAC AGCAGAAGCA AATGGAGTAG TGGACAGCAG TTTGGAGACG GATATTGTCT GCTCACAGGG AGGGAAAATA CTGTGGTGGG ATCGAGTCAA GAGGAAGGCC ACCATCTTGA CAGGGAATTC GAATTTTTGG GCTGTTGCTG GTGATGACAA CAGCGTGCAG ATATACACGG TTGCCGGCAG ACAAGCCTTG CCACTCTTGA TTTTGAGCTC ACCGGCAGCG TTCATGGATT GCGACAAGAA CTGGAGCTTA CTTCTGCTTA CTGGGTGTGG ATCTCTGCAC ATGTGGGATA TACGCAACTC CACTAGCATC CTCCTAGAAT CGGTCTATGC TCTGTTGTCG TGTTACCCGA GTTCACCCTC AGAGGCTGGT CAAGTGAGAG TGGTATCAGC GAGAATCTCC GAAGTTGGTG CACCCTTGGT TGTGCTGGAA AATCACCATG CTTTTTTGTT TCACATGGAC CTGAAGTGTT GGCTAAGGAT AGCTGACAGC TTCCCGTCAT CAACCTTCTG TGAATTCAGT CCCATCTTAA CATCCATGAG AGCAAAAGCT GGTCCAACTC AAAAGAAAGC TGGATCACTT TGCGTGGATG GCACGTCCTT CAACTTGCTG AAAGCTTCTG CTCACGAATC AGGCAGTTAC AATAATCGGT CACAGTTGGA GGCTCAAATG GGAGCAGCTT TAGCCCTCCG TTCTGCTGAG GAATATCGTC GCTGTCTTTT GGCCTATGCT CGATGCTTGG CAAGAGATGC AGACAAGTCG AGATTGAGAG AGCTCTGTGA AGAGTTGCTA GGACCCCGGC AGTCACCCGG TATTGACGAG AGTAGAGATC CTGCAGTTTC ATCTCAGTGG GACCCTTCTA TTCTTGGAAT GAAGAAACGG GATCTGCTTA AACAGGACGT GTTACCTGCT ATGGCATCCA ATCGAGCCAT CCAGAGACTT CTTAGTGAAT TTGTAGATCT ACTCACAGAA ATTGAATCCA GAGTACAGCA GGGTCAACCC GAAGGTTCAT CTCCCTGACT CATCAAAATA GCCATCATCA GGATTAGGTC TTTGACGGAA CAAGAAGCTA TATCGAGATT TTTGAGGGTT ATCGGACTCA GTATGCGGGT TCTTTTGGGA TCATTTGTAA GCCCAACCCC TGTCCCTGTA GATAGCAGCC CTCTCGGTAT GTCAAGCTAT TTTTTGTTTT CTCGATCTAA AGGAAATTGT GCTCCTTAGC TTTATCCCA |
CDS |
| >Mp1g07140.1 ATGGCGTTCC GAGATCACGA CAGTTTGTTT TGCACTCTGT GCGGCACAGG ACTGTCTTTT GGGTCGGCCA GTTATGCGAC CTGTCCACTC TGCAATTCCC ACCGCTCTGT TTCAGATTTC GAAGGCAAAG AGATTTGGTG TTCTAGCACT GCCGAGGACT TGATCAGGCG GCTGGGAATC GAGCCTTTAA TCCTGCCAGA TAGTGATGCC CAAGGTGGTC TTGAGAATGA GGAAATTCAG CAGAGGGCCG TTGTGAACGA TGAATGCCCG AAGTGCCGCA ATCCTCAGCT GGAGTATTAT ACCAGACAGT TACGGTCGGC CGATGAAGGG CAAACAGTGT TCTACGAATG TGCCAAATGC CAGTACAAAT TTTCGCAGAA CATGTAA |
Protein |
| >Mp1g07140.1 MAFRDHDSLF CTLCGTGLSF GSASYATCPL CNSHRSVSDF EGKEIWCSST AEDLIRRLGI EPLILPDSDA QGGLENEEIQ QRAVVNDECP KCRNPQLEYY TRQLRSADEG QTVFYECAKC QYKFSQNM |