Mp2g19480



Description

Annotation

Database ID Description
CDD cd00831 CHS_like
FunFam G3DSA:3.40.47.10:FF:000014 Chalcone synthase 1
FunFam G3DSA:3.40.47.10:FF:000025 Chalcone synthase 2
Gene3D G3DSA:3.40.47.10 -
KEGG K00660 chalcone synthase [EC:2.3.1.74]
PANTHER PTHR11877 HYDROXYMETHYLGLUTARYL-COA SYNTHASE
PIRSF PIRSF000451 PKS_III
Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain
Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain
SUPERFAMILY SSF53901 Thiolase-like
GO GO:0009058 biosynthetic process
GO GO:0030639 polyketide biosynthetic process
GO GO:0016746 acyltransferase activity
GO GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups
MapolyID Mapoly0055s0104 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPKS11 polyketide synthase MpPKS11 Published
Formerly registered as MpPKS/CHS3 until 2025-09-09.

Associated Literature (AI-based literature mining)

polyketide synthase MpPKS11 (from nomenclature)

0 core 1 peripheral

Zhu, T.-T., et al. (2022) · New Phytologist  research experimental background
MpPKS11 type III PKS

Transcript models

Transcript ID Location Sequences Extract region
Mp2g19480.2 chr2:23634173..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.1 chr2:23634284..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.3 chr2:23634284..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.4 chr2:23634831..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.5 chr2:23635290..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g19480 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g19480 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.