Mp2g23410



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.870.10 Endonuclease Chain A
KEGG K01115 phospholipase D1/2 [EC:3.1.4.4]
KOG KOG1329 Phospholipase D1; [I]
PANTHER PTHR18896 PHOSPHOLIPASE D
PIRSF PIRSF036470 PLD_plant
Pfam PF00614 Phospholipase D Active site motif
Pfam PF12357 Phospholipase D C terminal
Pfam PF13091 PLD-like domain
ProSiteProfiles PS50035 Phospholipase D phosphodiesterase active site profile.
SMART SM00155 pld_4
SUPERFAMILY SSF56024 Phospholipase D/nuclease
GO GO:0003824 catalytic activity
GO GO:0005509 calcium ion binding
GO GO:0009395 phospholipid catabolic process
GO GO:0004630 phospholipase D activity
GO GO:0046470 phosphatidylcholine metabolic process
GO GO:0005886 plasma membrane
GO GO:0016020 membrane
MapolyID Mapoly0191s0011 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPLD1 phospholipase D Provisional

Associated Literature (AI-based literature mining)

Phospholipase D for phospholipid remodeling, proposed functional equivalent of AtPLDz2. Up-regulated at all three time points with the strongest fold-change among lipid-remodeling genes under Pi starvation.

1 core 0 peripheral

Rico-Reséndiz, F., et al. (2020) · International Journal of Molecular Sciences  research experimental subject
Phospholipase D for phospholipid remodeling, proposed functional equivalent of AtPLDz2. Up-regulated at all three time points with the strongest fold-change among lipid-remodeling genes under Pi starvation.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g23410.1 chr2:28210109..28216715 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g23410 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g23410 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.