Mp3g22950



Description

Annotation

Database ID Description
CDD cd01803 Ubl_ubiquitin
FunFam G3DSA:3.10.20.90:FF:000016 Polyubiquitin 3
Gene3D G3DSA:3.10.20.90 -
KEGG K04551 ubiquitin B
KEGG K08770 ubiquitin C
KOG KOG0004 Ubiquitin/40S ribosomal protein S27a fusion; C-term missing; [J]
PANTHER PTHR10666 UBIQUITIN
PRINTS PR00348 Ubiquitin signature
Pfam PF00240 Ubiquitin family
ProSitePatterns PS00299 Ubiquitin domain signature.
ProSiteProfiles PS50053 Ubiquitin domain profile.
SMART SM00213 ubq_7
SUPERFAMILY SSF54236 Ubiquitin-like
GO GO:0031386 protein tag activity
GO GO:0005634 nucleus
GO GO:0016567 protein ubiquitination
GO GO:0031625 ubiquitin protein ligase binding
GO GO:0005515 protein binding
GO GO:0019941 modification-dependent protein catabolic process
GO GO:0005737 cytoplasm
MapolyID Mapoly0024s0072 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

Ubiquitin C promoter used to drive Cas9 expression in the CRISPR constructs.

0 core 1 peripheral

Zhu Y, Zhu X, Bi S, Teng D, Tahir M, Liu Y, Wang L, Liu H, Wen T, Zhu L, Li Z, Chen X, Zhang M, Cai W, Liu Z, Zheng M, Zhang Y, Gong JM, Wang JW, He Z, Li L, Wang E, Ji M, Yang W. (2026) · Developmental cell  research experimental tool
Ubiquitin C promoter used to drive Cas9 expression in the CRISPR constructs.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g22950.1 chr3:25902507..25904936 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g22950.2 chr3:25902507..25905334 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g22950 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g22950 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.