Mp5g04180



Description

Annotation

Database ID Description
CDD cd00449 PLPDE_IV
FunFam G3DSA:3.20.10.10:FF:000002 D-alanine aminotransferase
FunFam G3DSA:3.30.470.10:FF:000008 D-amino-acid transaminase, chloroplastic
Gene3D G3DSA:3.20.10.10 -
Gene3D G3DSA:3.30.470.10 -
KEGG K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
KOG KOG0975 Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily; [E]
PANTHER PTHR42743 AMINO-ACID AMINOTRANSFERASE
Pfam PF01063 Amino-transferase class IV
SUPERFAMILY SSF56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
GO GO:0003824 catalytic activity
GO GO:0019752 carboxylic acid metabolic process
MapolyID Mapoly0141s0025 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDAT D-amino-acid aminotransferase Published
Locus assigned by MarpolBase literature-mining curation (2026-10): Two of the four CRISPR gRNA spacers in the supplementary table map inside this gene (chr5:5,969,059 and chr5:5,969,610); the locus is annotated KOG0975, a fold-type IV aminotransferase.

Associated Literature (AI-based literature mining)

D-amino-acid aminotransferase; MpDAT, a transaminase, is shown to partially metabolize the imported d-alanine in M. polymorpha, contributing to d-Ala turnover. (from nomenclature)

1 core 0 peripheral

Chen H, Zhang Y, Shi Y, Zeng S, Chen K, Mou W, Li D. (2025) · Journal of agricultural and food chemistry  research experimental subject
MpDAT, a transaminase, is shown to partially metabolize the imported d-alanine in M. polymorpha, contributing to d-Ala turnover.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04180.2 chr5:5967875..5971454 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g04180.1 chr5:5968337..5971454 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g04180 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g04180 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.