Mp5g17165



Description

Annotation

Database ID Description
CDD cd00035 ChtBD1
CDD cd02877 GH18_hevamine_XipI_class_III
Gene3D G3DSA:3.20.20.80 Glycosidases
Gene3D G3DSA:3.30.60.10 -
KOG KOG4701 Chitinase; C-term missing; [M]
PANTHER PTHR45708 ENDOCHITINASE
Pfam PF00187 Chitin recognition protein
Pfam PF00704 Glycosyl hydrolases family 18
ProSitePatterns PS00026 Chitin recognition or binding domain signature.
ProSitePatterns PS01095 Glycosyl hydrolases family 18 (GH18) active site signature.
ProSiteProfiles PS50941 Chitin-binding type-1 domain profile.
ProSiteProfiles PS51910 Glycosyl hydrolases family 18 (GH18) domain profile.
SMART SM00270 ChitinBD_3
SUPERFAMILY SSF51445 (Trans)glycosidases
SUPERFAMILY SSF57016 Plant lectins/antimicrobial peptides
GO GO:0005576 extracellular region
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO GO:0008061 chitin binding
GO GO:0004568 chitinase activity
GO GO:0005975 carbohydrate metabolic process
MapolyID Mapoly0196s0008, Mapoly0196s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGH18.9 Cell wall related protein Provisional

Associated Literature (AI-based literature mining)

Cell wall related protein (from nomenclature)

0 core 1 peripheral

Li M, Wang C, Sonego P, Barbaro E, Bertoldi D, Cestaro A, Larcher R, Sanita di Toppi L, Varotto C. (2025) · Journal of hazardous materials  research experimental background
Glycosyl hydrolase family 18 protein among the arsenic-responsive candidates.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17165.1 chr5:21318849..21320652 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.