Mp5g22430
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd00118 | LysM |
| Gene3D | G3DSA:3.10.350.10 | LysM domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR33734 | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 |
| Pfam | PF01476 | LysM domain |
| ProSiteProfiles | PS50943 | Cro/C1-type HTH domain profile. |
| ProSiteProfiles | PS51782 | LysM domain profile. |
| SMART | SM00257 | LysM_2 |
| SUPERFAMILY | SSF54106 | LysM domain |
| MapolyID | Mapoly0010s0214 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLYP | Peptidoglycan biosynthesis | Provisional |
Associated Literature (AI-based literature mining)
Peptidoglycan biosynthesis (from nomenclature)
0 core 1 peripheral
Yotsui, I., et al. (2023)
· Current Biology research sequence comparator
LysM protein family member (comparison).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g22430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g22430.1 CGAGAGTAGA AGAAGTTCGA ACGCGAGCCA AACAGATCAT AACCGAGAGC TCAGAAGCAC TCACGAGCTG AAGAGCTGAA GCCAGCAGCC AGTAGCGTAG TACTAACCCA GCACTGCCCC TCTCCCTTGC CACTGCCTTT GCCCCTGCCC TGCCCTGCCC TGCCCCTAGC GCAGCCGACG AGCGAGAGAG AGCCTTCATA AAGAGATGCA GACGAGGGCG TGAAAAGTTG ATTTCTGGGG CCCTCAGACG ACGCTGTGGA TTTCGTCACT CCTCGACCTC CTCGGCCCTC CCCTCTCTTC TGTCGTTCGT CGCCATATCG CCTCTCTCTC TCACTCCTTC TCACTCCTTC CTTCACACGC TGCACACCGA ATTCGTTGAA ATTCGTGGCC GAGCTATTTG CCATAGCTCG TGCCTACATA GCGAGGGCGA GCCGAGTCGG TCCGAGCATC CACATTATTC TTCCACAGTC GCTCCTCCCT CTCGTCCATC ACATCAGACT TCGTCTCCTT CATTAGTCCT CTCCACCACC ATCATCTCAT TTCATCTCGA CCCGACTCAA CTGGAGATCG AGCGCAACTT GGCGGTGGGT CATCGAGAGA CAAACAGGAG CCTGCCTCTC GGTCTTCCGG AGTGAGGTAC GACCGCCAGC TCGAACCGAA TGCCGACCTC GTCTCGCGCC GCTGCGAATG GATGACGAGT GAAGGAATTT ACTGCCCAGC TTGACCGCCG GTCTTGACGT TCGAGCCGAT TTGTAGTAAT CTGTAAATTG TAAACTAAGA CCGTGGCTCG TGTTCCTTGG CAGCTGCAGC TCGAGCTCGA GCTTACGGGC GAGTCCGCAG CTCAGTTCGG TCGCCACTCG TCGAGGGGAG GGGAGAGGAT GGGAGGGATG AGGATTTCGC TGCTGGCAGT GTGCGGGCTG CTGGTGGTTC TATCGAGCAG CGCAGGGGTT GCGGCGCAGA CGATCAACTC GACGTACTAC ACGGAGGGAT GCTACTGGGG GACGTGCCCT GCGAGGATCA GCTACTTCGC CAAACCGGGG GAGACGCTGC AGACCATCGC CGACCTCTTC GGAGTGGACT TCGACGAGCT CATGGGCGCC AACAACCTCG ACATCACCAA GGCGGCCGAG CTGAAGACCA CGAAGCTGGC GAACGGGACG CTGCTCCTGG TGCCGCAGCT CTGCGAGTGC CTCAGCTCGG GCTCGACCTT CACGGGCGCC AGCGTGCGCA GGACCAACCG CACCGTGTAC ACCGTGAAGT CGGGCGACAC ATTGTCGAAG ATCGCCGACG ACTACTTCGG GGGCCTGACC ACATACCCGG AGATCGCCGC CGTGAACCAG ATCGAGAACG TGAACGAAAT CTTCCCCGAC CAGAAGCTCG TCATCCCCTT CATGTGCTCG TGCCCCAATG TCACCGAGCC CGAGCCCTAC CGGATCGGCC TCTCGTACCT TGTCCAGCCC GGCGATGACT TCAGCGAAAT CGCGACCAAG TTCGGCAGCT CCGCCTCCTT CCTCCAGACC TTCAACAACA TCACCAACTC CTCGGCCCTC CTTGCCTCGA GCCTCATCCG CGTCCCCCTC GCCGGTCCGT CCCACTAAAC CCATCTCCTC CTCCCGCTCT CTTGTCTCCT CCTCGTTTCG CTTCGCCTCG TCCCAGGGTT TAAGCTGGCG CTCGTACTTG TACGGGGCTC TCTTCTTCCC CGAAGAGAAT CACTGGCCTC AATGTGCTTC ACTTTTGGCC ACCCCTCGTG CATCGGGAAG CGCTCGCTCG CCCTGTCGAG GGTCGTCAGT CACGGCCCCG AGTTCCGACA CCGTGTCGGG ATCTTCGGTT TATCGTTTAG ATGAATGTGG ATTCTGTGGG GTCAGACTGC TTTCGAGCCT CTGCTTTTCA GATTTTTTCA GATTTCTAGA GTTTCAGATT TTTGCTGTTC GGTCGATGAA TGTGCTTAGC GGGGCAAATG CTGTCGTCCT GATCCGAGCC CGGCTCGAGC TGGAGCTTGT TTGCGGGCGA AGATGGGGAG GGGCTTGTTC TAGCGACATT GCATTACATT AGATTGCATT GTTGAAAGAC TGACTGACTG ATTCGTCGTC GATATTTCGG TGCAGCGTGC AAGGCCAACT TCAGCGGCGG AGCGCAGGAT GGGAATCTCG TGGTGACGAA CGGCGCCTAC AACTTGACCA CCAGCGAGGA CTGCGTGCAA TGCAAGTGCT ACATCGAAGG CAACGCGACG TAAGCACCCT CCCACCCCCA CCGGCACCCG CACCCGCTCG CTCCCGTCGC ACTTTTGGTC GAATTCGGCC GACGCCAGCG CAAGCGGTCG GTCTTACGTC GTCCGTCGTC GTCGTGGTAG CCGTCGAGGA GGTTGAGAGA TGACTGACTG AGTAACTGAG TGACTGACGT GGTCGGACGG TGACATTGGT TGCAGGGTGC CGTCGATGAA CTGCGTGCCG AACCCGGCCA GGGACACGGC CAAGTGCCCG AGCCTGGACT GCAGCGCCGG CCTGTCCATC GGCAACTTCA CCACCAAGGC CGTCGCAACG GGCTGCGAAG TGACCACGTG CGAGTACAAG GGCTTCATCA ACGCCGGCAA AGTCGAAAAA CCGTCAGTTC CCCCACCCCT CCCCTCACAT CCTCTCCATG GATTCCTCCT CTGCCATCGT TCAACGGCCG CCTGAACTTC GAAGCCACGA CTGAATGAGT GAATGATTGA ATGATTGTGC CCCCCGAAAC ATTGTACTGG ATGTCCTTTG GTATTTTGGC CCCCTGTATT TTAGGCCTCA ATTGAGCCCA TACTGGCTGA GCTTTCCAGA CGTTGCTGTC ATTTGTACTG ACGCGCTTGT CTCGTTCGTT TTCCAGATAC ACGCAATCGG TGGAACCGAC GTGCCCAGGT AATGGGCGAA CGAACCCCTC TCTCCTCTCG TTGTATTCAT TTGCGTTCGG ATGTTTGCGG TTTCGGGTTT GTCGGGGCCT ATGCTGACGA TTTCATGTGA TTGTGTGTGT GGATCAGCTT ATTCTTCTGC ACCGGCGCCT TCTCAGCTCG GTTCCGTGCC CGGATCGTCG AGCTCTCCGT CGACACCGGG AGCTGCCCCT GGCACTCCAG GAGCGCCGTC CAACAGCAGC TCTGTCGCAC TGAGCCCACG ACATCCTCTG CTCTTGAGCG CAGCGACCGT CGTGGTGTCC GTGCTCCTCT TCACGAGATG ATGATGATGA AAAAGTGTCA TCGATCAATT CCAATTCCTT GTATCTGAAT TTCGAGCTTA ACTTCACACG GTGCCACCTG ATGGTGGTCC TGCAAATTGT TTTGAGACGA TCTCAGGCCT TCTTACGCCT GCAGCAGCAG CAGCAGCAGC AGTAGCTGAG CTGATCATTA AAACTGTCAG CTGGAATTGG ACTTTGGCTG CTGGCTTGGC CTCGAGGGCT CAGTATCATC TCTCTCTCTT TCTTTCTATG CTGTAAAGGT CTTCTAGCTA TACTTTAGAG GTCGGATCGT GTGTTATGAT AGAACCCCTC GCTGCACTGT TCGGGGGGTG TGTTGTACTA TTGGCTGTAG GTTAGGCAAT GTGGATTCTT AGCTTACACT GCGGACTGGT CGGTGCCGGA AGTAGACGTG ACTGATTCAC CAAGCTCAGA CACCGACCCC CAGCTCAGAT GATCGGATCA TAGAACTAGC TGTAGGTGGC TGGGCTGCCA ATGAAGAAAC TGGATTGGCA CTCCAAGCTC GGGGCCATTT TTTGTACAAA CCATCATCTG CTCTGATTTC TGGGTCCACT GGATCTGAAT ATTTTAATGT CCATCCTACT TGAATTTCTG AGACGAAACT TTGAGCACCT GGTGTCGCTC TGCCGTTC |
mRNA UTR + CDS |
| >Mp5g22430.1 CGAGAGTAGA AGAAGTTCGA ACGCGAGCCA AACAGATCAT AACCGAGAGC TCAGAAGCAC TCACGAGCTG AAGAGCTGAA GCCAGCAGCC AGTAGCGTAG TACTAACCCA GCACTGCCCC TCTCCCTTGC CACTGCCTTT GCCCCTGCCC TGCCCTGCCC TGCCCCTAGC GCAGCCGACG AGCGAGAGAG AGCCTTCATA AAGAGATGCA GACGAGGGCG TGAAAAGTTG ATTTCTGGGG CCCTCAGACG ACGCTGTGGA TTTCGTCACT CCTCGACCTC CTCGGCCCTC CCCTCTCTTC TGTCGTTCGT CGCCATATCG CCTCTCTCTC TCACTCCTTC TCACTCCTTC CTTCACACGC TGCACACCGA ATTCGTTGAA ATTCGTGGCC GAGCTATTTG CCATAGCTCG TGCCTACATA GCGAGGGCGA GCCGAGTCGG TCCGAGCATC CACATTATTC TTCCACAGTC GCTCCTCCCT CTCGTCCATC ACATCAGACT TCGTCTCCTT CATTAGTCCT CTCCACCACC ATCATCTCAT TTCATCTCGA CCCGACTCAA CTGGAGATCG AGCGCAACTT GGCGGTGGGT CATCGAGAGA CAAACAGGAG CCTGCCTCTC GGTCTTCCGG AGTGAGCTGC AGCTCGAGCT CGAGCTTACG GGCGAGTCCG CAGCTCAGTT CGGTCGCCAC TCGTCGAGGG GAGGGGAGAG GATGGGAGGG ATGAGGATTT CGCTGCTGGC AGTGTGCGGG CTGCTGGTGG TTCTATCGAG CAGCGCAGGG GTTGCGGCGC AGACGATCAA CTCGACGTAC TACACGGAGG GATGCTACTG GGGGACGTGC CCTGCGAGGA TCAGCTACTT CGCCAAACCG GGGGAGACGC TGCAGACCAT CGCCGACCTC TTCGGAGTGG ACTTCGACGA GCTCATGGGC GCCAACAACC TCGACATCAC CAAGGCGGCC GAGCTGAAGA CCACGAAGCT GGCGAACGGG ACGCTGCTCC TGGTGCCGCA GCTCTGCGAG TGCCTCAGCT CGGGCTCGAC CTTCACGGGC GCCAGCGTGC GCAGGACCAA CCGCACCGTG TACACCGTGA AGTCGGGCGA CACATTGTCG AAGATCGCCG ACGACTACTT CGGGGGCCTG ACCACATACC CGGAGATCGC CGCCGTGAAC CAGATCGAGA ACGTGAACGA AATCTTCCCC GACCAGAAGC TCGTCATCCC CTTCATGTGC TCGTGCCCCA ATGTCACCGA GCCCGAGCCC TACCGGATCG GCCTCTCGTA CCTTGTCCAG CCCGGCGATG ACTTCAGCGA AATCGCGACC AAGTTCGGCA GCTCCGCCTC CTTCCTCCAG ACCTTCAACA ACATCACCAA CTCCTCGGCC CTCCTTGCCT CGAGCCTCAT CCGCGTCCCC CTCGCCGCGT GCAAGGCCAA CTTCAGCGGC GGAGCGCAGG ATGGGAATCT CGTGGTGACG AACGGCGCCT ACAACTTGAC CACCAGCGAG GACTGCGTGC AATGCAAGTG CTACATCGAA GGCAACGCGA CGGTGCCGTC GATGAACTGC GTGCCGAACC CGGCCAGGGA CACGGCCAAG TGCCCGAGCC TGGACTGCAG CGCCGGCCTG TCCATCGGCA ACTTCACCAC CAAGGCCGTC GCAACGGGCT GCGAAGTGAC CACGTGCGAG TACAAGGGCT TCATCAACGC CGGCAAAGTC GAAAAACCAT ACACGCAATC GGTGGAACCG ACGTGCCCAG CTTATTCTTC TGCACCGGCG CCTTCTCAGC TCGGTTCCGT GCCCGGATCG TCGAGCTCTC CGTCGACACC GGGAGCTGCC CCTGGCACTC CAGGAGCGCC GTCCAACAGC AGCTCTGTCG CACTGAGCCC ACGACATCCT CTGCTCTTGA GCGCAGCGAC CGTCGTGGTG TCCGTGCTCC TCTTCACGAG ATGATGATGA TGAAAAAGTG TCATCGATCA ATTCCAATTC CTTGTATCTG AATTTCGAGC TTAACTTCAC ACGGTGCCAC CTGATGGTGG TCCTGCAAAT TGTTTTGAGA CGATCTCAGG CCTTCTTACG CCTGCAGCAG CAGCAGCAGC AGCAGTAGCT GAGCTGATCA TTAAAACTGT CAGCTGGAAT TGGACTTTGG CTGCTGGCTT GGCCTCGAGG GCTCAGTATC ATCTCTCTCT CTTTCTTTCT ATGCTGTAAA GGTCTTCTAG CTATACTTTA GAGGTCGGAT CGTGTGTTAT GATAGAACCC CTCGCTGCAC TGTTCGGGGG GTGTGTTGTA CTATTGGCTG TAGGTTAGGC AATGTGGATT CTTAGCTTAC ACTGCGGACT GGTCGGTGCC GGAAGTAGAC GTGACTGATT CACCAAGCTC AGACACCGAC CCCCAGCTCA GATGATCGGA TCATAGAACT AGCTGTAGGT GGCTGGGCTG CCAATGAAGA AACTGGATTG GCACTCCAAG CTCGGGGCCA TTTTTTGTAC AAACCATCAT CTGCTCTGAT TTCTGGGTCC ACTGGATCTG AATATTTTAA TGTCCATCCT ACTTGAATTT CTGAGACGAA ACTTTGAGCA CCTGGTGTCG CTCTGCCGTT C |
CDS |
| >Mp5g22430.1 ATGGGAGGGA TGAGGATTTC GCTGCTGGCA GTGTGCGGGC TGCTGGTGGT TCTATCGAGC AGCGCAGGGG TTGCGGCGCA GACGATCAAC TCGACGTACT ACACGGAGGG ATGCTACTGG GGGACGTGCC CTGCGAGGAT CAGCTACTTC GCCAAACCGG GGGAGACGCT GCAGACCATC GCCGACCTCT TCGGAGTGGA CTTCGACGAG CTCATGGGCG CCAACAACCT CGACATCACC AAGGCGGCCG AGCTGAAGAC CACGAAGCTG GCGAACGGGA CGCTGCTCCT GGTGCCGCAG CTCTGCGAGT GCCTCAGCTC GGGCTCGACC TTCACGGGCG CCAGCGTGCG CAGGACCAAC CGCACCGTGT ACACCGTGAA GTCGGGCGAC ACATTGTCGA AGATCGCCGA CGACTACTTC GGGGGCCTGA CCACATACCC GGAGATCGCC GCCGTGAACC AGATCGAGAA CGTGAACGAA ATCTTCCCCG ACCAGAAGCT CGTCATCCCC TTCATGTGCT CGTGCCCCAA TGTCACCGAG CCCGAGCCCT ACCGGATCGG CCTCTCGTAC CTTGTCCAGC CCGGCGATGA CTTCAGCGAA ATCGCGACCA AGTTCGGCAG CTCCGCCTCC TTCCTCCAGA CCTTCAACAA CATCACCAAC TCCTCGGCCC TCCTTGCCTC GAGCCTCATC CGCGTCCCCC TCGCCGCGTG CAAGGCCAAC TTCAGCGGCG GAGCGCAGGA TGGGAATCTC GTGGTGACGA ACGGCGCCTA CAACTTGACC ACCAGCGAGG ACTGCGTGCA ATGCAAGTGC TACATCGAAG GCAACGCGAC GGTGCCGTCG ATGAACTGCG TGCCGAACCC GGCCAGGGAC ACGGCCAAGT GCCCGAGCCT GGACTGCAGC GCCGGCCTGT CCATCGGCAA CTTCACCACC AAGGCCGTCG CAACGGGCTG CGAAGTGACC ACGTGCGAGT ACAAGGGCTT CATCAACGCC GGCAAAGTCG AAAAACCATA CACGCAATCG GTGGAACCGA CGTGCCCAGC TTATTCTTCT GCACCGGCGC CTTCTCAGCT CGGTTCCGTG CCCGGATCGT CGAGCTCTCC GTCGACACCG GGAGCTGCCC CTGGCACTCC AGGAGCGCCG TCCAACAGCA GCTCTGTCGC ACTGAGCCCA CGACATCCTC TGCTCTTGAG CGCAGCGACC GTCGTGGTGT CCGTGCTCCT CTTCACGAGA TGA |
Protein |
| >Mp5g22430.1 MGGMRISLLA VCGLLVVLSS SAGVAAQTIN STYYTEGCYW GTCPARISYF AKPGETLQTI ADLFGVDFDE LMGANNLDIT KAAELKTTKL ANGTLLLVPQ LCECLSSGST FTGASVRRTN RTVYTVKSGD TLSKIADDYF GGLTTYPEIA AVNQIENVNE IFPDQKLVIP FMCSCPNVTE PEPYRIGLSY LVQPGDDFSE IATKFGSSAS FLQTFNNITN SSALLASSLI RVPLAACKAN FSGGAQDGNL VVTNGAYNLT TSEDCVQCKC YIEGNATVPS MNCVPNPARD TAKCPSLDCS AGLSIGNFTT KAVATGCEVT TCEYKGFINA GKVEKPYTQS VEPTCPAYSS APAPSQLGSV PGSSSSPSTP GAAPGTPGAP SNSSSVALSP RHPLLLSAAT VVVSVLLFTR |