Mp6g03260



Description

Annotation

Database ID Description
KOG KOG1792 Reticulon; [U]
PANTHER PTHR10994 RETICULON
Pfam PF02453 Reticulon
ProSiteProfiles PS50845 Reticulon domain profile.
MapolyID Mapoly0035s0106 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRTN1 Reticulon-family ER-shaping protein Published
Locus assigned by MarpolBase literature-mining curation (2026-10): Protein accession PTQ41334 = MARPO_0035s0106 corresponds to this locus. The paper prints "Mp6g19200" for both MpRTN1 and MpRTN2, which is a typographical error: Mp6g19200 is MpRTN2 (PTQ39501 = MARPO_0045s0143).

Associated Literature (AI-based literature mining)

Reticulon-family ER-shaping protein; Reticulon-family protein; shapes endoplasmic reticulum membrane (tubule/curvature formation) in M. polymorpha. (from nomenclature)

1 core 0 peripheral

Ishikawa, K., et al. (2022) · The Plant Journal  research experimental subject
Reticulon-family protein; shapes endoplasmic reticulum membrane (tubule/curvature formation) in M. polymorpha.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03260.2 chr6:4374290..4377004 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g03260.1 chr6:4374296..4376926 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g03260 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g03260 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.