Mp7g01790



Description

Annotation

Database ID Description
Gene3D G3DSA:3.20.20.140 -
KEGG K22213 6-methylsalicylate decarboxylase [EC:4.1.1.52]
KOG KOG4245 Predicted metal-dependent hydrolase of the TIM-barrel fold; [R]
PANTHER PTHR21240 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE
Pfam PF04909 Amidohydrolase
SUPERFAMILY SSF51556 Metallo-dependent hydrolases
GO GO:0016831 carboxy-lyase activity
GO GO:0019748 secondary metabolic process
GO GO:0005737 cytoplasm
GO GO:0016787 hydrolase activity
MapolyID Mapoly0099s0052 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

6-methylsalicylate decarboxylase; listed in Table 1 as a candidate MpKAN-regulated DEG.

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
6-methylsalicylate decarboxylase; listed in Table 1 as a candidate MpKAN-regulated DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g01790.1 chr7:2786815..2788885 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g01790 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g01790 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.