Mp8g04010



Description

Annotation

Database ID Description
CDD cd01384 MYSc_Myo11
CDD cd15475 MyosinXI_CBD
Coils Coil Coil
FunFam G3DSA:1.10.10.820:FF:000001 Myosin heavy chain
FunFam G3DSA:1.20.120.720:FF:000011 Myosin 2
FunFam G3DSA:1.20.5.190:FF:000001 unconventional myosin-Va
FunFam G3DSA:1.20.58.530:FF:000002 Class V myosin
Gene3D G3DSA:1.10.10.820 -
Gene3D G3DSA:1.20.120.720 Myosin VI head, motor domain, U50 subdomain
Gene3D G3DSA:1.20.5.190 -
Gene3D G3DSA:1.20.58.530 -
Gene3D G3DSA:3.30.70.1590 -
Gene3D G3DSA:3.40.850.10 Kinesin motor domain
KEGG K10357 myosin V
KOG KOG0160 Myosin class V heavy chain; [Z]
KOG KOG1892 Actin filament-binding protein Afadin; N-term missing; C-term missing; [Z]
KOG KOG4643 Uncharacterized coiled-coil protein; C-term missing; [S]
PANTHER PTHR13140 MYOSIN
PRINTS PR00193 Myosin heavy chain signature
Pfam PF00063 Myosin head (motor domain)
Pfam PF00612 IQ calmodulin-binding motif
Pfam PF01843 DIL domain
ProSiteProfiles PS50096 IQ motif profile.
ProSiteProfiles PS51126 Dilute domain profile.
ProSiteProfiles PS51456 Myosin motor domain profile.
ProSiteProfiles PS51844 Myosin N-terminal SH3-like domain profile.
SMART SM00015 iq_5
SMART SM00242 MYSc_2a
SMART SM01132 DIL_2
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
GO GO:0007015 actin filament organization
GO GO:0005524 ATP binding
GO GO:0005515 protein binding
GO GO:0030050 vesicle transport along actin filament
GO GO:0031982 vesicle
GO GO:0015629 actin cytoskeleton
GO GO:0000146 microfilament motor activity
GO GO:0005737 cytoplasm
GO GO:0003774 cytoskeletal motor activity
GO GO:0016459 myosin complex
GO GO:0051015 actin filament binding
MapolyID Mapoly0012s0190 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMYOSIN_XI-2 myosin Provisional

Associated Literature (AI-based literature mining)

The single myosin XI gene of M. polymorpha (Mp8g04010), characterized in vitro and by heterologous expression in Arabidopsis. Its actin-sliding velocity (4.2 um/s) and ATPase activity resembled Arabidopsis myosin XI-2, it colocalized with ER along F-actin, and it rescued growth, cytoplasmic streaming and actin organization defects in Arabidopsis xi quadruple knockouts, indicating conserved motor function.

1 core 1 peripheral

Duan, Z., et al. (2020) · The Plant Journal  research experimental subject
The single myosin XI gene of M. polymorpha (Mp8g04010), characterized in vitro and by heterologous expression in Arabidopsis. Its actin-sliding velocity (4.2 um/s) and ATPase activity resembled Arabidopsis myosin XI-2, it colocalized with ER along F-actin, and it rescued growth, cytoplasmic streaming and actin organization defects in Arabidopsis xi quadruple knockouts, indicating conserved motor function.
Bowman, J. L., et al. (2022) · Plant Cell  review citation background
class XI myosin

Transcript models

Transcript ID Location Sequences Extract region
Mp8g04010.2 chr8:4318502..4335572 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g04010.1 chr8:4318502..4340856 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g04010 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g04010 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.