Mp8g15610



Description

Annotation

Database ID Description
CDD cd00167 SANT
Coils Coil Coil
FunFam G3DSA:1.10.10.10:FF:000020 SWI/SNF complex subunit SMARCC2 isoform c
FunFam G3DSA:1.10.10.60:FF:000014 SWI/SNF complex subunit SMARCC2 isoform C
Gene3D G3DSA:1.10.10.10 -
Gene3D G3DSA:1.10.10.60 -
KEGG K11649 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
KOG KOG1279 Chromatin remodeling factor subunit and related transcription factors; [B]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12802 SWI/SNF COMPLEX-RELATED
Pfam PF00249 Myb-like DNA-binding domain
Pfam PF04433 SWIRM domain
Pfam PF16495 SWIRM-associated region 1
ProSiteProfiles PS50090 Myb-like domain profile.
ProSiteProfiles PS50934 SWIRM domain profile.
ProSiteProfiles PS51293 SANT domain profile.
SMART SM00717 sant
SUPERFAMILY SSF46689 Homeodomain-like
SUPERFAMILY SSF57850 RING/U-box
GO GO:0005515 protein binding
MapolyID Mapoly0079s0052 -

Nomenclature

Gene symbol Product Transcript ID Status
Mp1R-MYB15 transcription factor, MYB Published
MpSWI3A/B Subunit of SWITCH/SUCROSE NONFERMENTING (SWI/SNF) chromatin-remodeling complex Published

Associated Literature (AI-based literature mining)

Main subject. A CRISPR promoter mutation in MpSWI3A/B (Mp8g15610; aka Mapoly0079s0052), a SWI/SNF chromatin-remodeling complex subunit, disrupted male gametangiophore development and spermiogenesis while amplifying vegetative (asexual) propagation, identifying it as a regulator balancing the vegetative-to-reproductive transition.

1 core 0 peripheral

Lozano-Quiles M, Raval PK, Rensing SA, Gould SB. (2026) · Plant Reproduction  research experimental subject
Main subject. A CRISPR promoter mutation in MpSWI3A/B (Mp8g15610; aka Mapoly0079s0052), a SWI/SNF chromatin-remodeling complex subunit, disrupted male gametangiophore development and spermiogenesis while amplifying vegetative (asexual) propagation, identifying it as a regulator balancing the vegetative-to-reproductive transition.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15610.1 chr8:20178155..20183158 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g15610 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g15610 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.