MpVg00090
Description
Annotation
| Database | ID | Description |
|---|---|---|
| KOG | KOG1812 | Predicted E3 ubiquitin ligase; N-term missing; [O] |
| MapolyID | MapolyY_B0041 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining)
V-chromosome gene of unknown function, not expressed in the SUFpA[V] line; identified as a candidate target of FGMYB suppression.
0 core 1 peripheral
Kajiwara, T., et al. (2024)
· Plant & Cell Physiology research sequence background
V-chromosome gene of unknown function, not expressed in the SUFpA[V] line; identified as a candidate target of FGMYB suppression.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of MpVg00090 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >MpVg00090.1 CCGTACTGGC TGTCCGTAGA TTCCCAACTG ACTGATTAAA TCTGTTGAAG TTGATATCTG ATGCGACCCT CAGCGATCTA CTGTAGACTC TCGCCGATGA CGACGCTGAA TTCTTGACAT CACGGATAAA ATTATATGAG AGCAGAGTTT GCCACGTTTG TATTAGCTTT GACGCTTAGG GGTCCTAAAG GAGTTTGAAA ACCCTCGTCT AGGATCTCGT ACTGGGTTTC AAGGGTCAAA TTCTTCTGTC TCATCCTTCC GTGTATCATT CGCCATGTCA CGTTGATCCA TCGAGCGAAT GCTGACCTCG ATTGTTCTTG CATGAGAATT GAGAATTTTA AATATTCTGC ACAGATACTG AACATTTGAA GAAATACTGG TAATTTTTTT CGCATACTCT TCTTTCGTAC TGTGTATAAT GTATGTGTAT AATTCTTTCG TACCTTTTAC TTTATCGAAA GCTCTGTCGT TTCAATTTAT TTGGTCGATG AAAAGAACTG TTTAACACGA GAGTTTGCCA AACAAGTACT GCTAAATTTC CCGAAACAAC CACCACTTTT AGGAAATCAG GTACGACAGA CTTTTCTAAC TTCAGTATAC TACGTGAAAC AGATAGCAAG GTCATGGAAA CAAGATCATC ACGGTTTAGC TCGTAAGTAC CCTTCAGCAC TGAAAATCTT CCAGCAAAAG TAGAGCCCGG AAAGATCAGA GGATAGCACA GGATATATGT CTCTGAAAAT TAGGGCTCCT TGTACGATGC AATAAACCGT GGCCACATAT ATTCCTGGGT AATTGCATGT GTGTCCATGA GTAATAATAA GTGCCACATT CATTCACCTA ACTTGGCCAT CGTACGCTGC ACAGGGTTTA GGCACTCAGC ACATGACTGT TACGTTTGAC GGACATGTTC TATTTCTTTG TATATATTCT TTAGAGCTGT TGAGTAATTT TGATGCTTGT TTTTGATACA CTAGTCATCT CTAGGCACGT ATTCTGGAAT GCCTTAATAT ATGCTAGTTT GATTGTCAAA CAGTAAACAG GCTCTTGCTT TCAGGACTAA ACTCTACAGT TGCATCGGCG GAATATGAAT TCATGTTTAT GATTCGGTGT GACGTCCAAG ACAGAATTAA GTACTTTTAG AGGGGCCTTC ATTTCAGGCA GCTGAAGAAA TACGATCAAC ATCAATTGCA GAAAGGAACG GGCGACTTGA TGGTTCTTTT CCATATTACA TGTGGACTTT CCCAGACTCC CAAGTTTTGT GCTCAGAAGA GCCCTAATGT TTAACACTAA ATTCCTTGTT CCCACTTTCA AAGCGATTGC TCTCCGAAAG AATCGTGCAG AATGAGTGAA ATATGTTGAG GTCATGGTTT CGCAGGCACT GTGAGATAGG AGCAATCACT TCTAAGTCTT TTAAAGTCTT TTTAAACCAA CTGCTTATTT CTCTGAAAGT TAAGGTAGCA CAGGCATCAG CTTTTCTCAA TAAATGTGCC GGCGCTTGAA ACCACTTGAC AGGGAGTCAT TCACCCCTGA ACGATAAATC CGGTACTTCC CTCTGCGTCA TGCATCGATT AATAAATCAA AGACAGGTGG CTTTTCAGAT CACTAGGTAG ATTTGTTATA AGTTTATTAC AGTTTATAGG ATGAAAATCA ACAGCAAGTC AAATTTGCCA TATATGTGTT CAATATGTAC TTGACTTGAC AAAATTCTAG AGTATACTAT TTAATTGTAA CTTAAGTTTC TAATGCTTAT TAAGTCTGAA TGCAAGCATG ACAAGGACAG TTGCTTAAGT CACCCGTCAC GATTGAGAAG ATGACATTAG GTGGTCGAAC TGACAATCTG ATAAACCGTT CTAATGCTGT CCAGCTTTAA ACGGTCTGCG CTCAACTGAC AACGAAGACA GAAGCGCGCA AGGGTAACAT CCCACATCCA GATACAAATG CTATACGAAA GATGCTCAGC TGTCAAAAGG AGGTTATCGA TTCGAGGTTC GTAAAAGAAA GACGAGTTTG TTGAAGAGTG AATATCGTAA CAGGGAAGTT GCAGACAAAA GAACAGCATC AGGGTTGCGG CAAGATCCAC TTAATTCAAA ATCTTGTTGA AGAACAAGGA CGGAAATTAC TCAAAAAGAT CGAAATTGAT GAAGCATGAC GTGAAACATG AGAAAGGAAG AGAGCTCATT GCCAATGGGC AGGGAGTAGT TCGTTGTCCC TTTTGTAAGG AGACTTACAA GATCAACTGC AAGTTGAAGC TCATGGTCTG TCCTAACGAG CTTTGCCTCA AGATTCTTCC TACATCCTGC AGGGAATCTG AAACCACAGT TGGGGAAACT CAGAAACTTA CATCGTTCGG GATCCCAATC GACAAACAAA ACTCTGCAGA TGCATTATCG ATAATGATCA ATGCGAAGCC TAAGTGGAAG GCCGTGATAC AATGCAGCTC ATGCGAAAGT CTGATTACGA AATTTGGAAG TTGTAACAGA TTGATCTGCT TATGTGGTCA GACTATATGT TACATCTGTC GTATATGTTT ACCACAGAAC AGTAGATACG AACACTTCTG TCATCATGAA AGGTATCACA ACAATCTACC TTGCAGTTGT TGCCAATTAT GTGATCTTTA TGAAAGAAAA GTGGAAGATA CAACACAGAG AATTAAGCAG AATAGATACG ACTCTAATCT AGTGCAAAGG AGAAAGAGTG AAGAGGACAA TATATCTCAC TCGAGATGGA TGAGAGAGTG TTACTTTCCC TGCCCCTGAT AAATGGACGA GTATCCGTGA CAAAAGTACA ATTGCTCGAG CTTGTTAGCT TTCATTAACA ACTTGACACT AGGATTTATA TCGGCATGTA GAACTTGATA CACGTTTGTA CACTTTCCAT TCGACTTAAG AACGAAGGTT CTTAGGCGTA AAATTTTAGA CTTCGAGTGG CATCAAATTG TTTAAACATA TCAACTTGAT TCAAGTAATT ATGCGCAACT AGAGACTTTA TACTCTTTAT AATTTTGCTT CATGAATATC TGGCGACTAT CATCCCTCAT AAGCATAAAA TTTTAGCAGA TAGAGCAAAA TTAGAATATC AATCTTGTAA AGATCAACGA GACACTACTG GCCCTAGATC ACAAGTCATT ACTTCCTCCT AGTTGTATGA ACTGAAAGTA ATCGAGTATA ATTGAGCCAA AGTTGTAGAG AACTTTCAGA TATATAAATG TAAAAAAAAA ATCTGCTCAT GTGAAGTTTG TTCC |
mRNA UTR + CDS |
| >MpVg00090.1 CCGTACTGGC TGTCCGTAGA TTCCCAACTG ACTGATTAAA TCTGTTGAAG TTGATATCTG ATGCGACCCT CAGCGATCTA CTGTAGACTC TCGCCGATGA CGACGCTGAA TTCTTGACAT CACGGATAAA ATTATATGAG AGCAGAGTTT GCCACGTTTG TATTAGCTTT GACGCTTAGG GGTCCTAAAG GAGTTTGAAA ACCCTCGTCT AGGATCTCGT ACTGGGTTTC AAGGGTCAAA TTCTTCTGTC TCATCCTTCC GTGTATCATT CGCCATGTCA CGTTGATCCA TCGAGCGAAT GCTGACCTCG ATTGTTCTTG CATGAGAATT GAGAATTTTA AATATTCTGC ACAGATACTG AACATTTGAA GAAATACTGA TAGCAAGGTC ATGGAAACAA GATCATCACG GTTTAGCTCG ACTAAACTCT ACAGTTGCAT CGGCGGAATA TGAATTCATG TTTATGATTC GGTGTGACGT CCAAGACAGA ATTAAGTACT TTTAGAGGGG CCTTCATTTC AGGCAGCTGA AGAAATACGA TCAACATCAA TTGCAGAAAG GAACGGGCGA CTTGATGGTT CTTTTCCATA TTACATGTGG ACTTTCCCAG ACTCCCAAGT TTTGTGCTCA GAAGAGCCCT AATGTTTAAC ACTAAATTCC TTGTTCCCAC TTTCAAAGCG ATTGCTCTCC GAAAGAATCG TGCAGAATGA GTGAAATATG TTGAGGTCAT GGTTTCGCAG GCACTGTGAG ATAGGAGCAA TCACTTCTAA GTCTTTTAAA GTCTTTTTAA ACCAACTGCT TATTTCTCTG AAAGTTAAGG TAGCACAGGC ATCAGCTTTT CTCAATAAAT GTGCCGGCGC TTGAAACCAC TTGACAGGGA GTCATTCACC CCTGAACGAT AAATCCGCTT TAAACGGTCT GCGCTCAACT GACAACGAAG ACAGAAGCGC GCAAGGGTAA CATCCCACAT CCAGATACAA ATGCTATACG AAAGATGCTC AGCTGTCAAA AGGAGGTTAT CGATTCGAGG TTCGTAAAAG AAAGACGAGT TTGTTGAAGA GTGAATATCG TAACAGGGAA GTTGCAGACA AAAGAACAGC ATCAGGGTTG CGGCAAGATC CACTTAATTC AAAATCTTGT TGAAGAACAA GGACGGAAAT TACTCAAAAA GATCGAAATT GATGAAGCAT GACGTGAAAC ATGAGAAAGG AAGAGAGCTC ATTGCCAATG GGCAGGGAGT AGTTCGTTGT CCCTTTTGTA AGGAGACTTA CAAGATCAAC TGCAAGTTGA AGCTCATGGT CTGTCCTAAC GAGCTTTGCC TCAAGATTCT TCCTACATCC TGCAGGGAAT CTGAAACCAC AGTTGGGGAA ACTCAGAAAC TTACATCGTT CGGGATCCCA ATCGACAAAC AAAACTCTGC AGATGCATTA TCGATAATGA TCAATGCGAA GCCTAAGTGG AAGGCCGTGA TACAATGCAG CTCATGCGAA AGTCTGATTA CGAAATTTGG AAGTTGTAAC AGATTGATCT GCTTATGTGG TCAGACTATA TGTTACATCT GTCGTATATG TTTACCACAG AACAGTAGAT ACGAACACTT CTGTCATCAT GAAAGGTATC ACAACAATCT ACCTTGCAGT TGTTGCCAAT TATGTGATCT TTATGAAAGA AAAGTGGAAG ATACAACACA GAGAATTAAG CAGAATAGAT ACGACTCTAA TCTAGTGCAA AGGAGAAAGA GTGAAGAGGA CAATATATCT CACTCGAGAT GGATGAGAGA GTGTTACTTT CCCTGCCCCT GATAAATGGA CGAGTATCCG TGACAAAAGT ACAATTGCTC GAGCTTGTTA GCTTTCATTA ACAACTTGAC ACTAGGATTT ATATCGGCAT GTAGAACTTG ATACACGTTT GTACACTTTC CATTCGACTT AAGAACGAAG GTTCTTAGGC GTAAAATTTT AGACTTCGAG TGGCATCAAA TTGTTTAAAC ATATCAACTT GATTCAAGTA ATTATGCGCA ACTAGAGACT TTATACTCTT TATAATTTTG CTTCATGAAT ATCTGGCGAC TATCATCCCT CATAAGCATA AAATTTTAGC AGATAGAGCA AAATTAGAAT ATCAATCTTG TAAAGATCAA CGAGACACTA CTGGCCCTAG ATCACAAGTC ATTACTTCCT CCTAGTTGTA TGAACTGAAA GTAATCGAGT ATAATTGAGC CAAAGTTGTA GAGAACTTTC AGATATATAA ATGTAAAAAA AAAATCTGCT CATGTGAAGT TTGTTCC |
CDS |
| >MpVg00090.1 ATGAAGCATG ACGTGAAACA TGAGAAAGGA AGAGAGCTCA TTGCCAATGG GCAGGGAGTA GTTCGTTGTC CCTTTTGTAA GGAGACTTAC AAGATCAACT GCAAGTTGAA GCTCATGGTC TGTCCTAACG AGCTTTGCCT CAAGATTCTT CCTACATCCT GCAGGGAATC TGAAACCACA GTTGGGGAAA CTCAGAAACT TACATCGTTC GGGATCCCAA TCGACAAACA AAACTCTGCA GATGCATTAT CGATAATGAT CAATGCGAAG CCTAAGTGGA AGGCCGTGAT ACAATGCAGC TCATGCGAAA GTCTGATTAC GAAATTTGGA AGTTGTAACA GATTGATCTG CTTATGTGGT CAGACTATAT GTTACATCTG TCGTATATGT TTACCACAGA ACAGTAGATA CGAACACTTC TGTCATCATG AAAGGTATCA CAACAATCTA CCTTGCAGTT GTTGCCAATT ATGTGATCTT TATGAAAGAA AAGTGGAAGA TACAACACAG AGAATTAAGC AGAATAGATA CGACTCTAAT CTAGTGCAAA GGAGAAAGAG TGAAGAGGAC AATATATCTC ACTCGAGATG GATGAGAGAG TGTTACTTTC CCTGCCCCTG A |
Protein |
| >MpVg00090.1 MKHDVKHEKG RELIANGQGV VRCPFCKETY KINCKLKLMV CPNELCLKIL PTSCRESETT VGETQKLTSF GIPIDKQNSA DALSIMINAK PKWKAVIQCS SCESLITKFG SCNRLICLCG QTICYICRIC LPQNSRYEHF CHHERYHNNL PCSCCQLCDL YERKVEDTTQ RIKQNRYDSN LVQRRKSEED NISHSRWMRE CYFPCP |