MpVg00785



Description

Annotation

Database ID Description

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

V-chromosome gene of unknown function, not expressed in the SUFpA[V] line; identified as a candidate target of FGMYB suppression.

0 core 1 peripheral

Kajiwara, T., et al. (2024) · Plant & Cell Physiology  research sequence background
V-chromosome gene of unknown function, not expressed in the SUFpA[V] line; identified as a candidate target of FGMYB suppression.

Transcript models

Transcript ID Location Sequences Extract region
MpVg00785.1 chrV:5255133..5289221 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00785.3 chrV:5255133..5446488 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00785.2 chrV:5283332..5288460 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of MpVg00785 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of MpVg00785 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.