MpVg00980



Description

Annotation

Database ID Description
CDD cd12599 RRM1_SF2_plant_like
CDD cd12602 RRM2_SF2_plant_like
FunFam G3DSA:3.30.70.330:FF:000062 serine/arginine-rich splicing factor SR34A-like
FunFam G3DSA:3.30.70.330:FF:000244 serine/arginine-rich splicing factor SR34A-like
Gene3D G3DSA:3.30.70.330 -
KEGG K12890 serine/arginine-rich splicing factor 1
KOG KOG0105 Alternative splicing factor ASF/SF2 (RRM superfamily); [A]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR23003 RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Pfam PF00076 RNA recognition motif
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
SMART SM00360 rrm1_1
SUPERFAMILY SSF54928 RNA-binding domain, RBD
GO GO:0005634 nucleus
GO GO:0003723 RNA binding
GO GO:0003729 mRNA binding
GO GO:0005737 cytoplasm
GO GO:0003676 nucleic acid binding
MapolyID MapolyY_A0024 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSR7 SR proteins, RNA-splicing Provisional

Associated Literature (AI-based literature mining)

SR proteins, RNA-splicing (from nomenclature)

0 core 1 peripheral

Yue Y, Sablok G, He X, Hyvönen J, Dong S, Potente G, Liu Y, Szövényi P. (2026) · Genome Biology  research citation comparator
M. polymorpha ancestral UV-chromosome gametolog cited as a comparator; its Blasia pusilla homolog was found at an autosomal location rather than on the sex chromosome.

Transcript models

Transcript ID Location Sequences Extract region
MpVg00980.1 chrV:5916607..5933278 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00980.2 chrV:5916607..5933278 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of MpVg00980 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of MpVg00980 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.