Mapoly0007s0213



Description

RNA polymerase sigma factor

Annotation

Database ID Description
PFAM PF04539 Sigma-70 region 3
GO GO:0003677 DNA binding
PANTHER PTHR30603 RNA POLYMERASE SIGMA FACTOR RPO
GO GO:0006355 regulation of transcription, DNA-dependent
GO GO:0006352 DNA-dependent transcription, initiation
GO GO:0003700 sequence-specific DNA binding transcription factor activity
KEGGORTH K03093 RNA polymerase sigma factor
PANTHER PTHR30603:SF4
PFAM PF04542 Sigma-70 region 2
PFAM PF04545 Sigma-70, region 4
GO GO:0016987 sigma factor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpSIG5 Ortholog of Arabidopsis SIG5 gene Published

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0007s0213.1 scaffold_7:2351268..2355255 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.