Mapoly0025s0106



Description

transcription elongation factor SPT6

Annotation

Database ID Description
PFAM PF14635 Helix-hairpin-helix motif
GO GO:0003677 DNA binding
PANTHER PTHR10145:SF6 TRANSCRIPTION ELONGATION FACTOR SPT6-RELATED
PFAM PF14641 Helix-turn-helix DNA-binding domain of SPT6
GO GO:0006357 regulation of transcription from RNA polymerase II promoter
GO GO:0005515 protein binding
PFAM PF14633 SH2 domain
PFAM PF14639 Holliday-junction resolvase-like of SPT6
PFAM PF14878 Death-like domain of SPT6
GO GO:0032784 regulation of DNA-dependent transcription, elongation
PFAM PF14632 Acidic N-terminal SPT6
KEGGORTH K11292 transcription elongation factor SPT6
KOG KOG1856 Transcription elongation factor SPT6
PANTHER PTHR10145 TRANSCRIPTION ELONGATION FACTOR SPT6

Nomenclature

No gene symbols are registered for this gene.

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0025s0106.1 scaffold_25:1561006..1572909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.