Mp1g00530



Description

Annotation

Database ID Description
KEGG K12872 pre-mRNA-splicing factor RBM22/SLT11
KOG KOG0153 Predicted RNA-binding protein (RRM superfamily); [R]
Gene3D G3DSA:3.30.70.330 -
SUPERFAMILY SSF54928 RNA-binding domain, RBD
SMART SM00356 c3hfinal6
PANTHER PTHR14089:SF16 U2 AUXILIARY FACTOR SMALL SUBUNIT-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd12224 RRM_RBM22
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
SUPERFAMILY SSF90229 CCCH zinc finger
SMART SM00360 rrm1_1
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Pfam PF16131 Torus domain
PANTHER PTHR14089 PRE-MRNA-SPLICING FACTOR RBM22
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MapolyID Mapoly0103s0034 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H1 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g00530.1 chr1:619632..622747 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.